Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RPS4XP62701 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4XP62701 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4XP62701 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4XP62701 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4XP62701 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4XP62701 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.61■□□□□ 0.73
RPS4XP62701 SUDS3P1-201ENST00000505831 966 ntBASIC19.61■□□□□ 0.73
RPS4XP62701 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.61■□□□□ 0.73
RPS4XP62701 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.61■□□□□ 0.73
RPS4XP62701 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPS4XP62701 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4XP62701 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4XP62701 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.6■□□□□ 0.73
RPS4XP62701 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4XP62701 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RPS4XP62701 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4XP62701 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4XP62701 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.6■□□□□ 0.73
RPS4XP62701 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.6■□□□□ 0.73
RPS4XP62701 AL031432.3-201ENST00000607698 485 ntBASIC19.6■□□□□ 0.73
RPS4XP62701 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.6■□□□□ 0.73
RPS4XP62701 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4XP62701 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4XP62701 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.6■□□□□ 0.73
RPS4XP62701 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.59■□□□□ 0.73
RPS4XP62701 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.59■□□□□ 0.73
RPS4XP62701 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.59■□□□□ 0.73
RPS4XP62701 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.59■□□□□ 0.73
RPS4XP62701 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RPS4XP62701 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RPS4XP62701 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4XP62701 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4XP62701 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4XP62701 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4XP62701 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.58■□□□□ 0.73
RPS4XP62701 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4XP62701 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.58■□□□□ 0.73
RPS4XP62701 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4XP62701 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.58■□□□□ 0.72
RPS4XP62701 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.58■□□□□ 0.72
RPS4XP62701 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
RPS4XP62701 RARRES2P6-201ENST00000567333 442 ntBASIC19.58■□□□□ 0.72
RPS4XP62701 MIR3181-201ENST00000578512 73 ntBASIC19.58■□□□□ 0.72
RPS4XP62701 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.58■□□□□ 0.72
RPS4XP62701 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.58■□□□□ 0.72
RPS4XP62701 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RPS4XP62701 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.58■□□□□ 0.72
RPS4XP62701 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4XP62701 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4XP62701 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4XP62701 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4XP62701 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4XP62701 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RPS4XP62701 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4XP62701 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPS4XP62701 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 FBXW4P1-201ENST00000426721 2239 ntBASIC19.57■□□□□ 0.72
RPS4XP62701 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 SYT6-210ENST00000641643 1587 ntBASIC19.57■□□□□ 0.72
RPS4XP62701 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.57■□□□□ 0.72
RPS4XP62701 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.57■□□□□ 0.72
RPS4XP62701 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.57■□□□□ 0.72
RPS4XP62701 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPS4XP62701 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4XP62701 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.56■□□□□ 0.72
RPS4XP62701 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4XP62701 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4XP62701 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.56■□□□□ 0.72
RPS4XP62701 OR2I1P-207ENST00000453522 948 ntBASIC19.56■□□□□ 0.72
RPS4XP62701 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RPS4XP62701 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.56■□□□□ 0.72
RPS4XP62701 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4XP62701 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPS4XP62701 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.56■□□□□ 0.72
RPS4XP62701 AC010542.4-201ENST00000563151 1910 ntBASIC19.56■□□□□ 0.72
RPS4XP62701 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RPS4XP62701 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RPS4XP62701 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.56■□□□□ 0.72
RPS4XP62701 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4XP62701 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4XP62701 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms