Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM3P62310 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM3P62310 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM3P62310 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM3P62310 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
LSM3P62310 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM3P62310 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM3P62310 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.5■□□□□ 0.71
LSM3P62310 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM3P62310 AC007029.1-201ENST00000604183 313 ntBASIC19.5■□□□□ 0.71
LSM3P62310 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
LSM3P62310 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM3P62310 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LSM3P62310 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM3P62310 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.5■□□□□ 0.71
LSM3P62310 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM3P62310 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LSM3P62310 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.49■□□□□ 0.71
LSM3P62310 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.49■□□□□ 0.71
LSM3P62310 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LSM3P62310 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LSM3P62310 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.49■□□□□ 0.71
LSM3P62310 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM3P62310 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LSM3P62310 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM3P62310 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.48■□□□□ 0.71
LSM3P62310 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.48■□□□□ 0.71
LSM3P62310 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LSM3P62310 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LSM3P62310 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM3P62310 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM3P62310 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
LSM3P62310 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM3P62310 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.48■□□□□ 0.71
LSM3P62310 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM3P62310 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM3P62310 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM3P62310 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM3P62310 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.47■□□□□ 0.71
LSM3P62310 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSM3P62310 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM3P62310 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM3P62310 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.47■□□□□ 0.71
LSM3P62310 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.46■□□□□ 0.71
LSM3P62310 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.46■□□□□ 0.71
LSM3P62310 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.46■□□□□ 0.71
LSM3P62310 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.46■□□□□ 0.71
LSM3P62310 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.46■□□□□ 0.71
LSM3P62310 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LSM3P62310 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
LSM3P62310 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LSM3P62310 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM3P62310 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LSM3P62310 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM3P62310 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM3P62310 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LSM3P62310 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM3P62310 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LSM3P62310 AC144652.1-201ENST00000609974 1624 ntBASIC19.45■□□□□ 0.7
LSM3P62310 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM3P62310 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.45■□□□□ 0.7
LSM3P62310 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM3P62310 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM3P62310 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM3P62310 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM3P62310 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM3P62310 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM3P62310 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.44■□□□□ 0.7
LSM3P62310 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM3P62310 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM3P62310 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM3P62310 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM3P62310 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM3P62310 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.44■□□□□ 0.7
LSM3P62310 RPS2P7-201ENST00000447334 885 ntBASIC19.44■□□□□ 0.7
LSM3P62310 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.44■□□□□ 0.7
LSM3P62310 MIR3648-2-201ENST00000581792 180 ntBASIC19.44■□□□□ 0.7
LSM3P62310 MIR3648-1-201ENST00000615959 180 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms