Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS3P61009 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS3P61009 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.56■□□□□ 0.4
SPCS3P61009 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS3P61009 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.56■□□□□ 0.4
SPCS3P61009 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS3P61009 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS3P61009 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS3P61009 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.56■□□□□ 0.4
SPCS3P61009 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPCS3P61009 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS3P61009 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SPCS3P61009 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS3P61009 KRT8P33-201ENST00000508125 1423 ntBASIC17.55■□□□□ 0.4
SPCS3P61009 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS3P61009 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS3P61009 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS3P61009 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS3P61009 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SPCS3P61009 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.55■□□□□ 0.4
SPCS3P61009 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SPCS3P61009 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SPCS3P61009 AL031848.2-201ENST00000607670 837 ntBASIC17.55■□□□□ 0.4
SPCS3P61009 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS3P61009 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.55■□□□□ 0.4
SPCS3P61009 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS3P61009 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.55■□□□□ 0.4
SPCS3P61009 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.55■□□□□ 0.4
SPCS3P61009 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.55■□□□□ 0.4
SPCS3P61009 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS3P61009 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.55■□□□□ 0.4
SPCS3P61009 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.54■□□□□ 0.4
SPCS3P61009 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS3P61009 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS3P61009 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.54■□□□□ 0.4
SPCS3P61009 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.54■□□□□ 0.4
SPCS3P61009 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SPCS3P61009 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS3P61009 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SPCS3P61009 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.54■□□□□ 0.4
SPCS3P61009 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.54■□□□□ 0.4
SPCS3P61009 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS3P61009 AC010542.4-201ENST00000563151 1910 ntBASIC17.54■□□□□ 0.4
SPCS3P61009 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SPCS3P61009 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS3P61009 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS3P61009 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.54■□□□□ 0.4
SPCS3P61009 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS3P61009 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
SPCS3P61009 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.54■□□□□ 0.4
SPCS3P61009 AC021242.3-201ENST00000607598 1377 ntBASIC17.53■□□□□ 0.4
SPCS3P61009 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPCS3P61009 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.53■□□□□ 0.4
SPCS3P61009 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPCS3P61009 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPCS3P61009 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPCS3P61009 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
SPCS3P61009 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.53■□□□□ 0.4
SPCS3P61009 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.53■□□□□ 0.4
SPCS3P61009 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.53■□□□□ 0.4
SPCS3P61009 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.53■□□□□ 0.4
SPCS3P61009 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
SPCS3P61009 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.53■□□□□ 0.4
SPCS3P61009 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SPCS3P61009 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.53■□□□□ 0.4
SPCS3P61009 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.53■□□□□ 0.4
SPCS3P61009 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.53■□□□□ 0.4
SPCS3P61009 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPCS3P61009 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPCS3P61009 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SPCS3P61009 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPCS3P61009 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SPCS3P61009 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.52■□□□□ 0.4
SPCS3P61009 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPCS3P61009 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.52■□□□□ 0.4
SPCS3P61009 FAM99A-202ENST00000538190 1989 ntBASIC17.52■□□□□ 0.4
SPCS3P61009 AL033527.3-201ENST00000566366 1196 ntBASIC17.52■□□□□ 0.4
SPCS3P61009 CA15P2-201ENST00000611168 834 ntBASIC17.52■□□□□ 0.4
SPCS3P61009 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPCS3P61009 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPCS3P61009 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPCS3P61009 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPCS3P61009 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.52■□□□□ 0.39
SPCS3P61009 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.51■□□□□ 0.39
SPCS3P61009 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 BX664725.1-201ENST00000438252 379 ntBASIC17.51■□□□□ 0.39
SPCS3P61009 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.51■□□□□ 0.39
SPCS3P61009 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.51■□□□□ 0.39
SPCS3P61009 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS3P61009 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SPCS3P61009 AC026310.3-201ENST00000625186 2373 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 952.8 ms