Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.77■□□□□ 0.76
CDC42P60953 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CDC42P60953 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.77■□□□□ 0.76
CDC42P60953 DUX4L4-201ENST00000566884 1269 ntBASIC19.77■□□□□ 0.76
CDC42P60953 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.77■□□□□ 0.76
CDC42P60953 CA15P2-201ENST00000611168 834 ntBASIC19.77■□□□□ 0.76
CDC42P60953 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CDC42P60953 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.77■□□□□ 0.76
CDC42P60953 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42P60953 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDC42P60953 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CDC42P60953 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.76■□□□□ 0.75
CDC42P60953 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.76■□□□□ 0.75
CDC42P60953 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDC42P60953 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDC42P60953 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.76■□□□□ 0.75
CDC42P60953 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.76■□□□□ 0.75
CDC42P60953 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CDC42P60953 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42P60953 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.76■□□□□ 0.75
CDC42P60953 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42P60953 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.75■□□□□ 0.75
CDC42P60953 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDC42P60953 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.75■□□□□ 0.75
CDC42P60953 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.75■□□□□ 0.75
CDC42P60953 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.75■□□□□ 0.75
CDC42P60953 Z98882.1-201ENST00000622160 2253 ntBASIC19.75■□□□□ 0.75
CDC42P60953 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42P60953 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42P60953 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.75■□□□□ 0.75
CDC42P60953 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.75■□□□□ 0.75
CDC42P60953 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42P60953 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42P60953 AC005703.6-201ENST00000623265 1329 ntBASIC19.75■□□□□ 0.75
CDC42P60953 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42P60953 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42P60953 AC073130.3-201ENST00000624389 2278 ntBASIC19.74■□□□□ 0.75
CDC42P60953 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42P60953 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42P60953 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42P60953 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42P60953 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42P60953 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42P60953 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42P60953 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42P60953 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42P60953 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42P60953 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42P60953 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDC42P60953 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDC42P60953 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42P60953 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDC42P60953 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CDC42P60953 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42P60953 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.73■□□□□ 0.75
CDC42P60953 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42P60953 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.73■□□□□ 0.75
CDC42P60953 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42P60953 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDC42P60953 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.72■□□□□ 0.75
CDC42P60953 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.72■□□□□ 0.75
CDC42P60953 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDC42P60953 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.72■□□□□ 0.75
CDC42P60953 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42P60953 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42P60953 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDC42P60953 ABHD17AP5-201ENST00000580133 923 ntBASIC19.72■□□□□ 0.75
CDC42P60953 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CDC42P60953 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.72■□□□□ 0.75
CDC42P60953 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDC42P60953 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.72■□□□□ 0.75
CDC42P60953 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42P60953 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42P60953 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDC42P60953 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42P60953 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC42P60953 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms