Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN6P56747 OXCT2P1-201ENST00000447263 1535 ntBASIC20.91■□□□□ 0.94
CLDN6P56747 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN6P56747 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN6P56747 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.91■□□□□ 0.94
CLDN6P56747 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLDN6P56747 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.91■□□□□ 0.94
CLDN6P56747 AC068587.7-201ENST00000641602 218 ntBASIC20.91■□□□□ 0.94
CLDN6P56747 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN6P56747 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN6P56747 AC093323.1-202ENST00000635031 2045 ntBASIC20.9■□□□□ 0.94
CLDN6P56747 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN6P56747 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN6P56747 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN6P56747 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN6P56747 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN6P56747 AC007322.1-201ENST00000426983 750 ntBASIC20.9■□□□□ 0.94
CLDN6P56747 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN6P56747 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CLDN6P56747 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.9■□□□□ 0.94
CLDN6P56747 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN6P56747 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN6P56747 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN6P56747 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN6P56747 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN6P56747 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.89■□□□□ 0.94
CLDN6P56747 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN6P56747 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN6P56747 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN6P56747 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN6P56747 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN6P56747 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLDN6P56747 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLDN6P56747 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN6P56747 LINC00543-201ENST00000567234 1845 ntBASIC20.88■□□□□ 0.93
CLDN6P56747 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN6P56747 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CLDN6P56747 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN6P56747 AC069152.1-201ENST00000438030 544 ntBASIC20.88■□□□□ 0.93
CLDN6P56747 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN6P56747 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN6P56747 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN6P56747 AC005224.4-201ENST00000583262 1652 ntBASIC20.88■□□□□ 0.93
CLDN6P56747 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLDN6P56747 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN6P56747 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLDN6P56747 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.87■□□□□ 0.93
CLDN6P56747 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN6P56747 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLDN6P56747 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.87■□□□□ 0.93
CLDN6P56747 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN6P56747 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN6P56747 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN6P56747 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN6P56747 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN6P56747 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN6P56747 AC231657.2-201ENST00000624556 255 ntBASIC20.87■□□□□ 0.93
CLDN6P56747 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN6P56747 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN6P56747 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN6P56747 KRT87P-202ENST00000534226 1464 ntBASIC20.87■□□□□ 0.93
CLDN6P56747 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN6P56747 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN6P56747 SLC29A4P1-201ENST00000398760 971 ntBASIC20.86■□□□□ 0.93
CLDN6P56747 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.86■□□□□ 0.93
CLDN6P56747 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN6P56747 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.86■□□□□ 0.93
CLDN6P56747 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN6P56747 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.86■□□□□ 0.93
CLDN6P56747 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.86■□□□□ 0.93
CLDN6P56747 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.86■□□□□ 0.93
CLDN6P56747 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN6P56747 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN6P56747 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN6P56747 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN6P56747 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN6P56747 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN6P56747 AC004812.2-201ENST00000611079 2094 ntBASIC20.85■□□□□ 0.93
CLDN6P56747 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN6P56747 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.85■□□□□ 0.93
CLDN6P56747 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.85■□□□□ 0.93
CLDN6P56747 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN6P56747 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN6P56747 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN6P56747 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLDN6P56747 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.85■□□□□ 0.93
CLDN6P56747 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN6P56747 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN6P56747 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN6P56747 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN6P56747 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CLDN6P56747 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.84■□□□□ 0.93
CLDN6P56747 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN6P56747 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN6P56747 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN6P56747 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
CLDN6P56747 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN6P56747 AC008687.6-201ENST00000596318 630 ntBASIC20.84■□□□□ 0.93
CLDN6P56747 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN6P56747 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms