Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 NHX1YDR456W 1902 nt4.03□□□□□ -1.76
RPT4P53549 FAA1YOR317W 2103 nt4.03□□□□□ -1.76
RPT4P53549 SMP3YOR149C 1551 nt4.03□□□□□ -1.76
RPT4P53549 FAD1YDL045C 921 nt4.03□□□□□ -1.76
RPT4P53549 YDR222WYDR222W 1248 nt4.03□□□□□ -1.76
RPT4P53549 POP6YGR030C 477 nt4.03□□□□□ -1.76
RPT4P53549 CLC1YGR167W 702 nt4.03□□□□□ -1.76
RPT4P53549 AUR1YKL004W 1206 nt4.03□□□□□ -1.76
RPT4P53549 TOM7YNL070W 183 nt4.03□□□□□ -1.76
RPT4P53549 SPS2YDR522C 1509 nt4.03□□□□□ -1.76
RPT4P53549 YLR152CYLR152C 1731 nt4.03□□□□□ -1.76
RPT4P53549 SIP1YDR422C 2448 nt4.03□□□□□ -1.76
RPT4P53549 BUD27YFL023W 2391 nt4.02□□□□□ -1.77
RPT4P53549 NIT3YLR351C 876 nt4.02□□□□□ -1.77
RPT4P53549 MSA1YOR066W 1890 nt4.02□□□□□ -1.77
RPT4P53549 GAL11YOL051W 3246 nt4.02□□□□□ -1.77
RPT4P53549 YOL153CYOL153C 1746 nt4.01□□□□□ -1.77
RPT4P53549 RDH54YBR073W 2877 nt4.01□□□□□ -1.77
RPT4P53549 tF(GAA)DtF(GAA)D 73 nt4.01□□□□□ -1.77
RPT4P53549 tF(GAA)NtF(GAA)N 73 nt4.01□□□□□ -1.77
RPT4P53549 SPO73YER046W 432 nt4.01□□□□□ -1.77
RPT4P53549 YGL132WYGL132W 336 nt4.01□□□□□ -1.77
RPT4P53549 ADH4YGL256W 1149 nt4.01□□□□□ -1.77
RPT4P53549 WSS1YHR134W 810 nt4.01□□□□□ -1.77
RPT4P53549 BET1YIL004C 429 nt4.01□□□□□ -1.77
RPT4P53549 YIL014C-AYIL014C-A 315 nt4.01□□□□□ -1.77
RPT4P53549 AIR1YIL079C 1083 nt4.01□□□□□ -1.77
RPT4P53549 FMC1YIL098C 468 nt4.01□□□□□ -1.77
RPT4P53549 SOD1YJR104C 465 nt4.01□□□□□ -1.77
RPT4P53549 DID4YKL002W 699 nt4.01□□□□□ -1.77
RPT4P53549 SWC7YLR385C 399 nt4.01□□□□□ -1.77
RPT4P53549 RPA43YOR340C 981 nt4.01□□□□□ -1.77
RPT4P53549 FDH2YPL275W 711 nt4.01□□□□□ -1.77
RPT4P53549 RPS9BYBR189W 588 nt4.01□□□□□ -1.77
RPT4P53549 NOC2YOR206W 2133 nt4.01□□□□□ -1.77
RPT4P53549 MLH2YLR035C 2088 nt4.01□□□□□ -1.77
RPT4P53549 HCM1YCR065W 1695 nt4□□□□□ -1.77
RPT4P53549 PMS1YNL082W 2622 nt4□□□□□ -1.77
RPT4P53549 JIP5YPR169W 1479 nt4□□□□□ -1.77
RPT4P53549 DTD1YDL219W 453 nt4□□□□□ -1.77
RPT4P53549 SPI1YER150W 447 nt4□□□□□ -1.77
RPT4P53549 tK(UUU)DtK(UUU)D 73 nt4□□□□□ -1.77
RPT4P53549 tK(UUU)G1tK(UUU)G1 73 nt4□□□□□ -1.77
RPT4P53549 tK(UUU)G2tK(UUU)G2 73 nt4□□□□□ -1.77
RPT4P53549 tK(UUU)KtK(UUU)K 73 nt4□□□□□ -1.77
RPT4P53549 tK(UUU)LtK(UUU)L 73 nt4□□□□□ -1.77
RPT4P53549 tK(UUU)OtK(UUU)O 73 nt4□□□□□ -1.77
RPT4P53549 tK(UUU)PtK(UUU)P 73 nt4□□□□□ -1.77
RPT4P53549 YHR180WYHR180W 492 nt4□□□□□ -1.77
RPT4P53549 YUH1YJR099W 711 nt4□□□□□ -1.77
RPT4P53549 YAL069WYAL069W 315 nt4□□□□□ -1.77
RPT4P53549 YLR412C-AYLR412C-A 207 nt4□□□□□ -1.77
RPT4P53549 UTP23YOR004W 765 nt4□□□□□ -1.77
RPT4P53549 IAH1YOR126C 717 nt4□□□□□ -1.77
RPT4P53549 SNF2YOR290C 5112 nt4□□□□□ -1.77
RPT4P53549 CLN2YPL256C 1638 nt3.99□□□□□ -1.77
RPT4P53549 HCA4YJL033W 2313 nt3.99□□□□□ -1.77
RPT4P53549 TCO89YPL180W 2400 nt3.99□□□□□ -1.77
RPT4P53549 VAC17YCL063W 1272 nt3.99□□□□□ -1.77
RPT4P53549 YNL144W-AYNL144W-A 84 nt3.99□□□□□ -1.77
RPT4P53549 TEX1YNL253W 1269 nt3.99□□□□□ -1.77
RPT4P53549 TIR2YOR010C 756 nt3.99□□□□□ -1.77
RPT4P53549 TRS85YDR108W 2097 nt3.99□□□□□ -1.77
RPT4P53549 RAD54YGL163C 2697 nt3.98□□□□□ -1.77
RPT4P53549 GSC2YGR032W 5688 nt3.98□□□□□ -1.77
RPT4P53549 NUG1YER006W 1563 nt3.98□□□□□ -1.77
RPT4P53549 TED1YIL039W 1422 nt3.98□□□□□ -1.77
RPT4P53549 TRS120YDR407C 3870 nt3.98□□□□□ -1.77
RPT4P53549 VMA1YDL185W 3216 nt3.98□□□□□ -1.77
RPT4P53549 YDR290WYDR290W 330 nt3.98□□□□□ -1.77
RPT4P53549 ATP5YDR298C 639 nt3.98□□□□□ -1.77
RPT4P53549 ERJ5YFR041C 888 nt3.98□□□□□ -1.77
RPT4P53549 tV(CAC)DtV(CAC)D 73 nt3.98□□□□□ -1.77
RPT4P53549 tV(CAC)HtV(CAC)H 73 nt3.98□□□□□ -1.77
RPT4P53549 YIL025CYIL025C 375 nt3.98□□□□□ -1.77
RPT4P53549 YLR363W-AYLR363W-A 258 nt3.98□□□□□ -1.77
RPT4P53549 RIM11YMR139W 1113 nt3.98□□□□□ -1.77
RPT4P53549 PSF3YOL146W 585 nt3.98□□□□□ -1.77
RPT4P53549 CAT5YOR125C 702 nt3.98□□□□□ -1.77
RPT4P53549 YOR338WYOR338W 1092 nt3.98□□□□□ -1.77
RPT4P53549 RPO31YOR116C 4383 nt3.98□□□□□ -1.77
RPT4P53549 YGR027W-BYGR027W-B 5268 nt3.98□□□□□ -1.77
RPT4P53549 YLR227W-BYLR227W-B 5268 nt3.98□□□□□ -1.77
RPT4P53549 YPR158C-DYPR158C-D 5268 nt3.98□□□□□ -1.77
RPT4P53549 SEN1YLR430W 6696 nt3.97□□□□□ -1.77
RPT4P53549 CTK1YKL139W 1587 nt3.97□□□□□ -1.77
RPT4P53549 ALO1YML086C 1581 nt3.97□□□□□ -1.77
RPT4P53549 NUP133YKR082W 3474 nt3.97□□□□□ -1.77
RPT4P53549 APE2YKL157W 2859 nt3.97□□□□□ -1.77
RPT4P53549 YGR018CYGR018C 330 nt3.97□□□□□ -1.77
RPT4P53549 FOL3YMR113W 1284 nt3.97□□□□□ -1.77
RPT4P53549 PNT1YOR266W 1272 nt3.97□□□□□ -1.77
RPT4P53549 UAF30YOR295W 687 nt3.97□□□□□ -1.77
RPT4P53549 DIP2YLR129W 2832 nt3.96□□□□□ -1.78
RPT4P53549 BUD6YLR319C 2367 nt3.96□□□□□ -1.78
RPT4P53549 RNA14YMR061W 2034 nt3.96□□□□□ -1.78
RPT4P53549 APC9YLR102C 798 nt3.96□□□□□ -1.78
RPT4P53549 TAF14YPL129W 735 nt3.96□□□□□ -1.78
RPT4P53549 POC4YPL144W 447 nt3.96□□□□□ -1.78
RPT4P53549 ROK1YGL171W 1695 nt3.96□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 46.8 ms