Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 RPN2YIL075C 2838 nt3.2□□□□□ -1.9
UFD1P53044 PWP2YCR057C 2772 nt3.2□□□□□ -1.9
UFD1P53044 GRX6YDL010W 696 nt3.2□□□□□ -1.9
UFD1P53044 MSW1YDR268W 1140 nt3.2□□□□□ -1.9
UFD1P53044 YGR051CYGR051C 324 nt3.2□□□□□ -1.9
UFD1P53044 SAY1YGR263C 1275 nt3.2□□□□□ -1.9
UFD1P53044 YHL045WYHL045W 348 nt3.2□□□□□ -1.9
UFD1P53044 OSW1YOR255W 837 nt3.2□□□□□ -1.9
UFD1P53044 YOR314WYOR314W 330 nt3.2□□□□□ -1.9
UFD1P53044 TSR1YDL060W 2367 nt3.2□□□□□ -1.9
UFD1P53044 YOL019WYOL019W 1656 nt3.2□□□□□ -1.9
UFD1P53044 ASI1YMR119W 1875 nt3.2□□□□□ -1.9
UFD1P53044 TAF1YGR274C 3201 nt3.19□□□□□ -1.9
UFD1P53044 CIT1YNR001C 1440 nt3.19□□□□□ -1.9
UFD1P53044 URC2YDR520C 2319 nt3.19□□□□□ -1.9
UFD1P53044 SIP1YDR422C 2448 nt3.19□□□□□ -1.9
UFD1P53044 RPS0AYGR214W 759 nt3.19□□□□□ -1.9
UFD1P53044 YHR173CYHR173C 339 nt3.19□□□□□ -1.9
UFD1P53044 ATP12YJL180C 978 nt3.19□□□□□ -1.9
UFD1P53044 HRT3YLR097C 1035 nt3.19□□□□□ -1.9
UFD1P53044 CDC73YLR418C 1182 nt3.19□□□□□ -1.9
UFD1P53044 YPT7YML001W 627 nt3.19□□□□□ -1.9
UFD1P53044 COQ5YML110C 924 nt3.19□□□□□ -1.9
UFD1P53044 RAD14YMR201C 1116 nt3.19□□□□□ -1.9
UFD1P53044 NDJ1YOL104C 1059 nt3.19□□□□□ -1.9
UFD1P53044 YPL162CYPL162C 822 nt3.19□□□□□ -1.9
UFD1P53044 PFK26YIL107C 2484 nt3.19□□□□□ -1.9
UFD1P53044 FKH2YNL068C 2589 nt3.19□□□□□ -1.9
UFD1P53044 CLB5YPR120C 1308 nt3.19□□□□□ -1.9
UFD1P53044 YAK1YJL141C 2424 nt3.18□□□□□ -1.9
UFD1P53044 VAC17YCL063W 1272 nt3.18□□□□□ -1.9
UFD1P53044 snR63snR63 255 nt3.18□□□□□ -1.9
UFD1P53044 TRX3YCR083W 384 nt3.18□□□□□ -1.9
UFD1P53044 YDL241WYDL241W 372 nt3.18□□□□□ -1.9
UFD1P53044 FLD1YLR404W 858 nt3.18□□□□□ -1.9
UFD1P53044 PRX1YBL064C 786 nt3.18□□□□□ -1.9
UFD1P53044 ASI2YNL159C 870 nt3.18□□□□□ -1.9
UFD1P53044 BMT2YBR141C 1014 nt3.18□□□□□ -1.9
UFD1P53044 MRPL37YBR268W 318 nt3.18□□□□□ -1.9
UFD1P53044 SPB4YFL002C 1821 nt3.18□□□□□ -1.9
UFD1P53044 COP1YDL145C 3606 nt3.18□□□□□ -1.9
UFD1P53044 ETP1YHL010C 1758 nt3.17□□□□□ -1.9
UFD1P53044 IES6YEL044W 501 nt3.17□□□□□ -1.9
UFD1P53044 YGL152CYGL152C 678 nt3.17□□□□□ -1.9
UFD1P53044 YHR069C-AYHR069C-A 363 nt3.17□□□□□ -1.9
UFD1P53044 RAD10YML095C 633 nt3.17□□□□□ -1.9
UFD1P53044 CDC45YLR103C 1953 nt3.17□□□□□ -1.9
UFD1P53044 CTR86YCR054C 1692 nt3.17□□□□□ -1.9
UFD1P53044 RSF2YJR127C 4143 nt3.17□□□□□ -1.9
UFD1P53044 POL31YJR006W 1464 nt3.16□□□□□ -1.9
UFD1P53044 YEL074WYEL074W 339 nt3.16□□□□□ -1.9
UFD1P53044 CIR1YGR207C 786 nt3.16□□□□□ -1.9
UFD1P53044 tV(CAC)DtV(CAC)D 73 nt3.16□□□□□ -1.9
UFD1P53044 tV(CAC)HtV(CAC)H 73 nt3.16□□□□□ -1.9
UFD1P53044 YJL028WYJL028W 336 nt3.16□□□□□ -1.9
UFD1P53044 CDC8YJR057W 651 nt3.16□□□□□ -1.9
UFD1P53044 HTA2YBL003C 399 nt3.16□□□□□ -1.9
UFD1P53044 YML053CYML053C 639 nt3.16□□□□□ -1.9
UFD1P53044 RSF1YMR030W 1131 nt3.16□□□□□ -1.9
UFD1P53044 MCM1YMR043W 861 nt3.16□□□□□ -1.9
UFD1P53044 IST1YNL265C 897 nt3.16□□□□□ -1.9
UFD1P53044 MDN1YLR106C 14733 nt3.15□□□□□ -1.9
UFD1P53044 RNR1YER070W 2667 nt3.15□□□□□ -1.91
UFD1P53044 NOP6YDL213C 678 nt3.15□□□□□ -1.91
UFD1P53044 YDR271CYDR271C 372 nt3.15□□□□□ -1.91
UFD1P53044 POF1YCL047C 777 nt3.15□□□□□ -1.91
UFD1P53044 TDA3YHR009C 1572 nt3.15□□□□□ -1.91
UFD1P53044 BMS1YPL217C 3552 nt3.15□□□□□ -1.91
UFD1P53044 GLC3YEL011W 2115 nt3.14□□□□□ -1.91
UFD1P53044 ROK1YGL171W 1695 nt3.14□□□□□ -1.91
UFD1P53044 SPS2YDR522C 1509 nt3.14□□□□□ -1.91
UFD1P53044 EXO70YJL085W 1872 nt3.14□□□□□ -1.91
UFD1P53044 MSS2YDL107W 1056 nt3.14□□□□□ -1.91
UFD1P53044 YGR149WYGR149W 1299 nt3.14□□□□□ -1.91
UFD1P53044 DPH1YIL103W 1278 nt3.14□□□□□ -1.91
UFD1P53044 YIR040CYIR040C 333 nt3.14□□□□□ -1.91
UFD1P53044 RPC17YJL011C 486 nt3.14□□□□□ -1.91
UFD1P53044 URA4YLR420W 1095 nt3.14□□□□□ -1.91
UFD1P53044 TRI1YMR233W 681 nt3.14□□□□□ -1.91
UFD1P53044 YOR020W-AYOR020W-A 273 nt3.14□□□□□ -1.91
UFD1P53044 RPS7AYOR096W 573 nt3.14□□□□□ -1.91
UFD1P53044 TMA16YOR252W 537 nt3.14□□□□□ -1.91
UFD1P53044 SSE2YBR169C 2082 nt3.14□□□□□ -1.91
UFD1P53044 LTV1YKL143W 1392 nt3.13□□□□□ -1.91
UFD1P53044 SMP3YOR149C 1551 nt3.13□□□□□ -1.91
UFD1P53044 RDS1YCR106W 2499 nt3.13□□□□□ -1.91
UFD1P53044 YCL075WYCL075W 441 nt3.13□□□□□ -1.91
UFD1P53044 COS12YGL263W 1143 nt3.13□□□□□ -1.91
UFD1P53044 SPS4YOR313C 1017 nt3.13□□□□□ -1.91
UFD1P53044 YPL168WYPL168W 1293 nt3.13□□□□□ -1.91
UFD1P53044 DER1YBR201W 636 nt3.13□□□□□ -1.91
UFD1P53044 GAT2YMR136W 1683 nt3.13□□□□□ -1.91
UFD1P53044 RAD4YER162C 2265 nt3.13□□□□□ -1.91
UFD1P53044 PMS1YNL082W 2622 nt3.12□□□□□ -1.91
UFD1P53044 RRP5YMR229C 5190 nt3.12□□□□□ -1.91
UFD1P53044 YCR085WYCR085W 354 nt3.12□□□□□ -1.91
UFD1P53044 BAT2YJR148W 1131 nt3.12□□□□□ -1.91
UFD1P53044 YAL064W-BYAL064W-B 381 nt3.12□□□□□ -1.91
UFD1P53044 IRC25YLR021W 540 nt3.12□□□□□ -1.91
UFD1P53044 RPS28BYLR264W 204 nt3.12□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms