Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGA2P52926 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HMGA2P52926 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGA2P52926 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.83■□□□□ 0.77
HMGA2P52926 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMGA2P52926 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HMGA2P52926 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGA2P52926 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.83■□□□□ 0.76
HMGA2P52926 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMGA2P52926 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGA2P52926 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGA2P52926 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HMGA2P52926 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGA2P52926 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGA2P52926 AC079089.2-201ENST00000531211 1277 ntBASIC19.82■□□□□ 0.76
HMGA2P52926 Z92544.1-202ENST00000571933 1220 ntBASIC19.82■□□□□ 0.76
HMGA2P52926 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.82■□□□□ 0.76
HMGA2P52926 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.82■□□□□ 0.76
HMGA2P52926 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
HMGA2P52926 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA2P52926 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA2P52926 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGA2P52926 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA2P52926 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HMGA2P52926 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA2P52926 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HMGA2P52926 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HMGA2P52926 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGA2P52926 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA2P52926 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGA2P52926 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA2P52926 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA2P52926 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGA2P52926 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA2P52926 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA2P52926 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA2P52926 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA2P52926 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA2P52926 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HMGA2P52926 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
HMGA2P52926 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA2P52926 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGA2P52926 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA2P52926 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA2P52926 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.8■□□□□ 0.76
HMGA2P52926 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA2P52926 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HMGA2P52926 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA2P52926 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA2P52926 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA2P52926 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA2P52926 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HMGA2P52926 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HMGA2P52926 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGA2P52926 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA2P52926 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.79■□□□□ 0.76
HMGA2P52926 MTDHP2-201ENST00000601468 714 ntBASIC19.79■□□□□ 0.76
HMGA2P52926 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
HMGA2P52926 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HMGA2P52926 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA2P52926 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA2P52926 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGA2P52926 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA2P52926 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGA2P52926 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
HMGA2P52926 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
HMGA2P52926 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA2P52926 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA2P52926 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGA2P52926 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA2P52926 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA2P52926 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.78■□□□□ 0.76
HMGA2P52926 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGA2P52926 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HMGA2P52926 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGA2P52926 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA2P52926 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA2P52926 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGA2P52926 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGA2P52926 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGA2P52926 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGA2P52926 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGA2P52926 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGA2P52926 KRT125P-201ENST00000546827 989 ntBASIC19.77■□□□□ 0.76
HMGA2P52926 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HMGA2P52926 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGA2P52926 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HMGA2P52926 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGA2P52926 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGA2P52926 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms