Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ZNF140P52738 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.67■■□□□ 1.06
ZNF140P52738 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF140P52738 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF140P52738 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ZNF140P52738 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF140P52738 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF140P52738 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF140P52738 IGHV3-19-201ENST00000521488 291 ntBASIC21.67■■□□□ 1.06
ZNF140P52738 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.67■■□□□ 1.06
ZNF140P52738 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
ZNF140P52738 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF140P52738 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF140P52738 OR7E47P-201ENST00000546390 1422 ntBASIC21.66■■□□□ 1.06
ZNF140P52738 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF140P52738 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.66■■□□□ 1.06
ZNF140P52738 SUDS3P1-201ENST00000505831 966 ntBASIC21.66■■□□□ 1.06
ZNF140P52738 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF140P52738 AL136967.2-201ENST00000623968 743 ntBASIC21.66■■□□□ 1.06
ZNF140P52738 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ZNF140P52738 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF140P52738 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ZNF140P52738 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF140P52738 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF140P52738 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF140P52738 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ZNF140P52738 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ZNF140P52738 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ZNF140P52738 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ZNF140P52738 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 C11orf96-202ENST00000528572 1834 ntBASIC21.65■■□□□ 1.06
ZNF140P52738 AC091305.1-201ENST00000479476 895 ntBASIC21.65■■□□□ 1.06
ZNF140P52738 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.65■■□□□ 1.06
ZNF140P52738 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.65■■□□□ 1.06
ZNF140P52738 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF140P52738 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF140P52738 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF140P52738 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF140P52738 RASA4CP-201ENST00000424092 1398 ntBASIC21.64■■□□□ 1.06
ZNF140P52738 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF140P52738 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
ZNF140P52738 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF140P52738 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
ZNF140P52738 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF140P52738 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF140P52738 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.64■■□□□ 1.05
ZNF140P52738 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.64■■□□□ 1.05
ZNF140P52738 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF140P52738 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF140P52738 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.63■■□□□ 1.05
ZNF140P52738 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ZNF140P52738 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.63■■□□□ 1.05
ZNF140P52738 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.63■■□□□ 1.05
ZNF140P52738 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.63■■□□□ 1.05
ZNF140P52738 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.63■■□□□ 1.05
ZNF140P52738 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.63■■□□□ 1.05
ZNF140P52738 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.63■■□□□ 1.05
ZNF140P52738 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.63■■□□□ 1.05
ZNF140P52738 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.63■■□□□ 1.05
ZNF140P52738 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF140P52738 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
ZNF140P52738 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF140P52738 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.62■■□□□ 1.05
ZNF140P52738 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF140P52738 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.62■■□□□ 1.05
ZNF140P52738 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF140P52738 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.62■■□□□ 1.05
ZNF140P52738 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF140P52738 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF140P52738 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ZNF140P52738 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF140P52738 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
ZNF140P52738 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
ZNF140P52738 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF140P52738 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF140P52738 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF140P52738 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.61■■□□□ 1.05
ZNF140P52738 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF140P52738 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF140P52738 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF140P52738 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF140P52738 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms