Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1P51610 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1P51610 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.02■□□□□ 0.64
HCFC1P51610 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1P51610 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1P51610 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HCFC1P51610 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.02■□□□□ 0.64
HCFC1P51610 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.02■□□□□ 0.64
HCFC1P51610 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCFC1P51610 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCFC1P51610 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCFC1P51610 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.02■□□□□ 0.63
HCFC1P51610 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HCFC1P51610 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.01■□□□□ 0.63
HCFC1P51610 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.01■□□□□ 0.63
HCFC1P51610 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1P51610 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1P51610 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1P51610 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1P51610 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HCFC1P51610 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1P51610 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1P51610 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC1P51610 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19■□□□□ 0.63
HCFC1P51610 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC1P51610 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC1P51610 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC1P51610 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19■□□□□ 0.63
HCFC1P51610 KRT18P6-201ENST00000555540 1265 ntBASIC19■□□□□ 0.63
HCFC1P51610 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19■□□□□ 0.63
HCFC1P51610 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC1P51610 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19■□□□□ 0.63
HCFC1P51610 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HCFC1P51610 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC1P51610 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HCFC1P51610 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19■□□□□ 0.63
HCFC1P51610 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HCFC1P51610 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC1P51610 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC1P51610 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.99■□□□□ 0.63
HCFC1P51610 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HCFC1P51610 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
HCFC1P51610 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.99■□□□□ 0.63
HCFC1P51610 MIR4651-201ENST00000582622 73 ntBASIC18.99■□□□□ 0.63
HCFC1P51610 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.99■□□□□ 0.63
HCFC1P51610 TMEM191A-211ENST00000637163 1067 ntBASIC18.99■□□□□ 0.63
HCFC1P51610 MYCNOS-205ENST00000641950 531 ntBASIC18.99■□□□□ 0.63
HCFC1P51610 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HCFC1P51610 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.99■□□□□ 0.63
HCFC1P51610 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.99■□□□□ 0.63
HCFC1P51610 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.99■□□□□ 0.63
HCFC1P51610 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1P51610 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC1P51610 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HCFC1P51610 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1P51610 AF201337.1-201ENST00000520239 748 ntBASIC18.98■□□□□ 0.63
HCFC1P51610 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.98■□□□□ 0.63
HCFC1P51610 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1P51610 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
HCFC1P51610 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1P51610 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC1P51610 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
HCFC1P51610 AC009237.3-201ENST00000393279 1427 ntBASIC18.98■□□□□ 0.63
HCFC1P51610 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC1P51610 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.98■□□□□ 0.63
HCFC1P51610 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1P51610 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.98■□□□□ 0.63
HCFC1P51610 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HCFC1P51610 AC098934.4-201ENST00000564127 592 ntBASIC18.98■□□□□ 0.63
HCFC1P51610 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC1P51610 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1P51610 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1P51610 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HCFC1P51610 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1P51610 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1P51610 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
HCFC1P51610 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC1P51610 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC1P51610 ABCB10P4-201ENST00000566803 2184 ntBASIC18.97■□□□□ 0.63
HCFC1P51610 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1P51610 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1P51610 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HCFC1P51610 SLC29A4P1-201ENST00000398760 971 ntBASIC18.97■□□□□ 0.63
HCFC1P51610 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC1P51610 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC1P51610 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.97■□□□□ 0.63
HCFC1P51610 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.97■□□□□ 0.63
HCFC1P51610 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.97■□□□□ 0.63
HCFC1P51610 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1P51610 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HCFC1P51610 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1P51610 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1P51610 AL353803.4-201ENST00000565882 1934 ntBASIC18.97■□□□□ 0.63
HCFC1P51610 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
HCFC1P51610 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1P51610 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.96■□□□□ 0.63
HCFC1P51610 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HCFC1P51610 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1P51610 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.96■□□□□ 0.63
HCFC1P51610 AL121832.2-201ENST00000610979 668 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms