Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC39.49■■■■□ 3.91
SMARCA4P51532 FAM201B-201ENST00000458407 597 ntBASIC39.49■■■■□ 3.91
SMARCA4P51532 AC098590.1-201ENST00000468126 897 ntBASIC39.49■■■■□ 3.91
SMARCA4P51532 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC39.49■■■■□ 3.91
SMARCA4P51532 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC39.49■■■■□ 3.91
SMARCA4P51532 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC39.49■■■■□ 3.91
SMARCA4P51532 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
SMARCA4P51532 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC39.48■■■■□ 3.91
SMARCA4P51532 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC39.48■■■■□ 3.91
SMARCA4P51532 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC39.48■■■■□ 3.91
SMARCA4P51532 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC39.47■■■■□ 3.91
SMARCA4P51532 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC39.47■■■■□ 3.91
SMARCA4P51532 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC39.47■■■■□ 3.91
SMARCA4P51532 AC105036.2-201ENST00000569468 176 ntBASIC39.46■■■■□ 3.91
SMARCA4P51532 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC39.46■■■■□ 3.91
SMARCA4P51532 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC39.46■■■■□ 3.91
SMARCA4P51532 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC39.46■■■■□ 3.91
SMARCA4P51532 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC39.45■■■■□ 3.91
SMARCA4P51532 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
SMARCA4P51532 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC39.44■■■■□ 3.9
SMARCA4P51532 AC138907.5-202ENST00000569484 235 ntBASIC39.44■■■■□ 3.9
SMARCA4P51532 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC39.44■■■■□ 3.9
SMARCA4P51532 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC39.44■■■■□ 3.9
SMARCA4P51532 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC39.44■■■■□ 3.9
SMARCA4P51532 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC39.44■■■■□ 3.9
SMARCA4P51532 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC39.43■■■■□ 3.9
SMARCA4P51532 DUSP8P5-201ENST00000422884 1815 ntBASIC39.43■■■■□ 3.9
SMARCA4P51532 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC39.43■■■■□ 3.9
SMARCA4P51532 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
SMARCA4P51532 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC39.43■■■■□ 3.9
SMARCA4P51532 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
SMARCA4P51532 PRORSD1P-201ENST00000295112 541 ntBASIC39.43■■■■□ 3.9
SMARCA4P51532 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC39.43■■■■□ 3.9
SMARCA4P51532 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC39.43■■■■□ 3.9
SMARCA4P51532 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC39.43■■■■□ 3.9
SMARCA4P51532 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
SMARCA4P51532 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC39.43■■■■□ 3.9
SMARCA4P51532 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC39.42■■■■□ 3.9
SMARCA4P51532 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
SMARCA4P51532 KRT18P20-201ENST00000548986 1279 ntBASIC39.41■■■■□ 3.9
SMARCA4P51532 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC39.41■■■■□ 3.9
SMARCA4P51532 AC013268.1-206ENST00000638368 961 ntBASIC39.41■■■■□ 3.9
SMARCA4P51532 AC112229.1-201ENST00000639295 961 ntBASIC39.41■■■■□ 3.9
SMARCA4P51532 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC39.41■■■■□ 3.9
SMARCA4P51532 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
SMARCA4P51532 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
SMARCA4P51532 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC39.4■■■■□ 3.9
SMARCA4P51532 RPS2P52-201ENST00000469610 820 ntBASIC39.4■■■■□ 3.9
SMARCA4P51532 SLC7A5P1-201ENST00000568957 537 ntBASIC39.4■■■■□ 3.9
SMARCA4P51532 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC39.4■■■■□ 3.9
SMARCA4P51532 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
SMARCA4P51532 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC39.4■■■■□ 3.9
SMARCA4P51532 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
SMARCA4P51532 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC39.4■■■■□ 3.9
SMARCA4P51532 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC39.4■■■■□ 3.9
SMARCA4P51532 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC39.39■■■■□ 3.9
SMARCA4P51532 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC39.39■■■■□ 3.9
SMARCA4P51532 AC007322.4-201ENST00000509611 723 ntBASIC39.39■■■■□ 3.9
SMARCA4P51532 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC39.38■■■■□ 3.89
SMARCA4P51532 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC39.38■■■■□ 3.89
SMARCA4P51532 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC39.38■■■■□ 3.89
SMARCA4P51532 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
SMARCA4P51532 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC39.37■■■■□ 3.89
SMARCA4P51532 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC39.37■■■■□ 3.89
SMARCA4P51532 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC39.37■■■■□ 3.89
SMARCA4P51532 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
SMARCA4P51532 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC39.36■■■■□ 3.89
SMARCA4P51532 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
SMARCA4P51532 AC083880.1-201ENST00000608266 535 ntBASIC39.36■■■■□ 3.89
SMARCA4P51532 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC39.36■■■■□ 3.89
SMARCA4P51532 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC39.36■■■■□ 3.89
SMARCA4P51532 RNA5SP413-201ENST00000516373 109 ntBASIC39.36■■■■□ 3.89
SMARCA4P51532 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC39.35■■■■□ 3.89
SMARCA4P51532 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC39.35■■■■□ 3.89
SMARCA4P51532 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC39.35■■■■□ 3.89
SMARCA4P51532 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
SMARCA4P51532 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC39.35■■■■□ 3.89
SMARCA4P51532 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC39.34■■■■□ 3.89
SMARCA4P51532 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC39.34■■■■□ 3.89
SMARCA4P51532 RARRES2P4-201ENST00000514074 484 ntBASIC39.34■■■■□ 3.89
SMARCA4P51532 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
SMARCA4P51532 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
SMARCA4P51532 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC39.34■■■■□ 3.89
SMARCA4P51532 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC39.33■■■■□ 3.89
SMARCA4P51532 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC39.33■■■■□ 3.89
SMARCA4P51532 PHB2-213ENST00000546111 858 ntTSL 2 BASIC39.33■■■■□ 3.89
SMARCA4P51532 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC39.33■■■■□ 3.89
SMARCA4P51532 AC068338.2-201ENST00000563278 1430 ntBASIC39.33■■■■□ 3.89
SMARCA4P51532 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC39.32■■■■□ 3.89
SMARCA4P51532 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC39.32■■■■□ 3.89
SMARCA4P51532 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC39.32■■■■□ 3.88
SMARCA4P51532 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC39.32■■■■□ 3.88
SMARCA4P51532 PPP1R14BP2-201ENST00000426284 444 ntBASIC39.31■■■■□ 3.88
SMARCA4P51532 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC39.31■■■■□ 3.88
SMARCA4P51532 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
SMARCA4P51532 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
SMARCA4P51532 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC39.3■■■■□ 3.88
SMARCA4P51532 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
SMARCA4P51532 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC39.3■■■■□ 3.88
SMARCA4P51532 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC39.3■■■■□ 3.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms