Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.55■□□□□ 0.88
PRIM2P49643 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.55■□□□□ 0.88
PRIM2P49643 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
PRIM2P49643 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.55■□□□□ 0.88
PRIM2P49643 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRIM2P49643 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRIM2P49643 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRIM2P49643 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
PRIM2P49643 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PRIM2P49643 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.54■□□□□ 0.88
PRIM2P49643 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.54■□□□□ 0.88
PRIM2P49643 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.54■□□□□ 0.88
PRIM2P49643 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.54■□□□□ 0.88
PRIM2P49643 AC092171.4-201ENST00000609130 632 ntBASIC20.54■□□□□ 0.88
PRIM2P49643 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.54■□□□□ 0.88
PRIM2P49643 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRIM2P49643 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRIM2P49643 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRIM2P49643 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRIM2P49643 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PRIM2P49643 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRIM2P49643 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRIM2P49643 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PRIM2P49643 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.53■□□□□ 0.88
PRIM2P49643 AC099791.2-201ENST00000605725 427 ntBASIC20.53■□□□□ 0.88
PRIM2P49643 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRIM2P49643 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.53■□□□□ 0.88
PRIM2P49643 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRIM2P49643 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.53■□□□□ 0.88
PRIM2P49643 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRIM2P49643 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.53■□□□□ 0.88
PRIM2P49643 FBXW4P1-201ENST00000426721 2239 ntBASIC20.53■□□□□ 0.88
PRIM2P49643 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRIM2P49643 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRIM2P49643 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRIM2P49643 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRIM2P49643 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRIM2P49643 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRIM2P49643 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.52■□□□□ 0.88
PRIM2P49643 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.52■□□□□ 0.88
PRIM2P49643 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.52■□□□□ 0.88
PRIM2P49643 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRIM2P49643 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRIM2P49643 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.52■□□□□ 0.87
PRIM2P49643 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRIM2P49643 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRIM2P49643 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRIM2P49643 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRIM2P49643 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRIM2P49643 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.51■□□□□ 0.87
PRIM2P49643 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.51■□□□□ 0.87
PRIM2P49643 AL512631.2-201ENST00000604634 923 ntBASIC20.51■□□□□ 0.87
PRIM2P49643 pRNA.6-201ENST00000610482 90 ntBASIC20.51■□□□□ 0.87
PRIM2P49643 pRNA.5-201ENST00000612139 90 ntBASIC20.51■□□□□ 0.87
PRIM2P49643 pRNA.11-201ENST00000618423 90 ntBASIC20.51■□□□□ 0.87
PRIM2P49643 pRNA.13-201ENST00000619112 90 ntBASIC20.51■□□□□ 0.87
PRIM2P49643 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.51■□□□□ 0.87
PRIM2P49643 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PRIM2P49643 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRIM2P49643 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PRIM2P49643 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PRIM2P49643 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PRIM2P49643 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.5■□□□□ 0.87
PRIM2P49643 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.5■□□□□ 0.87
PRIM2P49643 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.5■□□□□ 0.87
PRIM2P49643 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.5■□□□□ 0.87
PRIM2P49643 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PRIM2P49643 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.5■□□□□ 0.87
PRIM2P49643 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRIM2P49643 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PRIM2P49643 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
PRIM2P49643 AC007375.3-201ENST00000600936 2314 ntBASIC20.49■□□□□ 0.87
PRIM2P49643 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.49■□□□□ 0.87
PRIM2P49643 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRIM2P49643 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRIM2P49643 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRIM2P49643 AC006455.2-201ENST00000429931 906 ntBASIC20.49■□□□□ 0.87
PRIM2P49643 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.49■□□□□ 0.87
PRIM2P49643 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.49■□□□□ 0.87
PRIM2P49643 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRIM2P49643 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.49■□□□□ 0.87
PRIM2P49643 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRIM2P49643 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
PRIM2P49643 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.49■□□□□ 0.87
PRIM2P49643 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRIM2P49643 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms