Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 Z98882.1-201ENST00000622160 2253 ntBASIC17.07■□□□□ 0.32
CDC34P49427 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC34P49427 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC34P49427 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC34P49427 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDC34P49427 AC092667.1-201ENST00000434301 2586 ntBASIC17.06■□□□□ 0.32
CDC34P49427 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDC34P49427 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC34P49427 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC34P49427 AC022616.5-201ENST00000518796 181 ntBASIC17.06■□□□□ 0.32
CDC34P49427 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDC34P49427 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC34P49427 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC34P49427 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC34P49427 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC34P49427 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC34P49427 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CDC34P49427 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC34P49427 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC34P49427 LINC01521-201ENST00000504184 1943 ntBASIC17.06■□□□□ 0.32
CDC34P49427 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC34P49427 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDC34P49427 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC34P49427 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC34P49427 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC34P49427 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDC34P49427 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC34P49427 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC34P49427 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDC34P49427 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC34P49427 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC34P49427 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC34P49427 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC34P49427 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC34P49427 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDC34P49427 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC34P49427 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC34P49427 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDC34P49427 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDC34P49427 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDC34P49427 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.04■□□□□ 0.32
CDC34P49427 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDC34P49427 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDC34P49427 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDC34P49427 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 AL157384.1-201ENST00000445995 2473 ntBASIC17.04■□□□□ 0.32
CDC34P49427 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC34P49427 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDC34P49427 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC34P49427 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC34P49427 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC34P49427 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC34P49427 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC34P49427 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC34P49427 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.03■□□□□ 0.32
CDC34P49427 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC34P49427 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC34P49427 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDC34P49427 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC34P49427 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC34P49427 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDC34P49427 AF131216.4-201ENST00000638924 1588 ntBASIC17.02■□□□□ 0.32
CDC34P49427 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC34P49427 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDC34P49427 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC34P49427 LINC01529-204ENST00000636474 1715 ntBASIC17.02■□□□□ 0.32
CDC34P49427 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC34P49427 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC34P49427 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.02■□□□□ 0.32
CDC34P49427 MIR7108-201ENST00000614319 87 ntBASIC17.02■□□□□ 0.32
CDC34P49427 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
CDC34P49427 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC34P49427 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC34P49427 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC34P49427 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC34P49427 FEM1AP4-201ENST00000443167 1987 ntBASIC17.02■□□□□ 0.31
CDC34P49427 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC34P49427 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDC34P49427 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC34P49427 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC34P49427 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDC34P49427 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC34P49427 AF106564.1-201ENST00000607058 2553 ntBASIC17.01■□□□□ 0.31
CDC34P49427 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC34P49427 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.01■□□□□ 0.31
CDC34P49427 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CDC34P49427 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC34P49427 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC34P49427 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC34P49427 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC34P49427 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms