Protein–RNA interactions for Protein: P48995

TRPC1, Short transient receptor potential channel 1, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1P48995 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRPC1P48995 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRPC1P48995 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.8■□□□□ 0.92
TRPC1P48995 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRPC1P48995 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.8■□□□□ 0.92
TRPC1P48995 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRPC1P48995 LINC01960-201ENST00000563759 1884 ntBASIC20.79■□□□□ 0.92
TRPC1P48995 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
TRPC1P48995 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.79■□□□□ 0.92
TRPC1P48995 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.79■□□□□ 0.92
TRPC1P48995 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRPC1P48995 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRPC1P48995 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRPC1P48995 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.78■□□□□ 0.92
TRPC1P48995 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRPC1P48995 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRPC1P48995 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRPC1P48995 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRPC1P48995 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRPC1P48995 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRPC1P48995 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.78■□□□□ 0.92
TRPC1P48995 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.78■□□□□ 0.92
TRPC1P48995 MIR4466-201ENST00000606121 54 ntBASIC20.78■□□□□ 0.92
TRPC1P48995 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.78■□□□□ 0.92
TRPC1P48995 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.78■□□□□ 0.92
TRPC1P48995 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRPC1P48995 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.78■□□□□ 0.92
TRPC1P48995 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.78■□□□□ 0.92
TRPC1P48995 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.77■□□□□ 0.92
TRPC1P48995 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRPC1P48995 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.77■□□□□ 0.92
TRPC1P48995 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRPC1P48995 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRPC1P48995 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRPC1P48995 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.77■□□□□ 0.92
TRPC1P48995 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRPC1P48995 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.77■□□□□ 0.92
TRPC1P48995 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRPC1P48995 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRPC1P48995 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
TRPC1P48995 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRPC1P48995 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRPC1P48995 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRPC1P48995 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRPC1P48995 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.76■□□□□ 0.91
TRPC1P48995 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.76■□□□□ 0.91
TRPC1P48995 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRPC1P48995 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRPC1P48995 AL512631.2-201ENST00000604634 923 ntBASIC20.76■□□□□ 0.91
TRPC1P48995 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.76■□□□□ 0.91
TRPC1P48995 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TRPC1P48995 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRPC1P48995 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRPC1P48995 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRPC1P48995 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRPC1P48995 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRPC1P48995 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.75■□□□□ 0.91
TRPC1P48995 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.75■□□□□ 0.91
TRPC1P48995 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.75■□□□□ 0.91
TRPC1P48995 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.75■□□□□ 0.91
TRPC1P48995 AC009102.2-201ENST00000606772 1639 ntBASIC20.75■□□□□ 0.91
TRPC1P48995 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPC1P48995 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRPC1P48995 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPC1P48995 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPC1P48995 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRPC1P48995 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRPC1P48995 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.74■□□□□ 0.91
TRPC1P48995 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.74■□□□□ 0.91
TRPC1P48995 AC007375.3-201ENST00000600936 2314 ntBASIC20.74■□□□□ 0.91
TRPC1P48995 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.74■□□□□ 0.91
TRPC1P48995 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRPC1P48995 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRPC1P48995 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPC1P48995 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRPC1P48995 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRPC1P48995 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPC1P48995 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPC1P48995 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms