Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT6CP48668 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.98■□□□□ 0.95
KRT6CP48668 AL031602.1-201ENST00000633169 911 ntBASIC20.98■□□□□ 0.95
KRT6CP48668 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT6CP48668 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT6CP48668 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT6CP48668 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT6CP48668 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT6CP48668 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT6CP48668 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT6CP48668 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT6CP48668 MIR3181-201ENST00000578512 73 ntBASIC20.97■□□□□ 0.95
KRT6CP48668 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT6CP48668 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT6CP48668 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 FBXW4P1-201ENST00000426721 2239 ntBASIC20.96■□□□□ 0.95
KRT6CP48668 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
KRT6CP48668 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.96■□□□□ 0.95
KRT6CP48668 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 AL356441.2-201ENST00000443009 864 ntBASIC20.96■□□□□ 0.95
KRT6CP48668 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
KRT6CP48668 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6CP48668 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6CP48668 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT6CP48668 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT6CP48668 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6CP48668 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6CP48668 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT6CP48668 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.95■□□□□ 0.94
KRT6CP48668 AL512631.2-201ENST00000604634 923 ntBASIC20.95■□□□□ 0.94
KRT6CP48668 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KRT6CP48668 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6CP48668 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6CP48668 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
KRT6CP48668 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
KRT6CP48668 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT6CP48668 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT6CP48668 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT6CP48668 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
KRT6CP48668 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT6CP48668 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
KRT6CP48668 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT6CP48668 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT6CP48668 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT6CP48668 AC068587.7-201ENST00000641602 218 ntBASIC20.94■□□□□ 0.94
KRT6CP48668 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6CP48668 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6CP48668 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT6CP48668 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6CP48668 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT6CP48668 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6CP48668 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6CP48668 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT6CP48668 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6CP48668 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
KRT6CP48668 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT6CP48668 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6CP48668 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT6CP48668 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6CP48668 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6CP48668 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6CP48668 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT6CP48668 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6CP48668 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT6CP48668 AC079089.2-201ENST00000531211 1277 ntBASIC20.92■□□□□ 0.94
KRT6CP48668 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT6CP48668 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT6CP48668 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT6CP48668 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6CP48668 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
KRT6CP48668 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6CP48668 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6CP48668 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6CP48668 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6CP48668 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT6CP48668 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KRT6CP48668 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6CP48668 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6CP48668 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6CP48668 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6CP48668 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms