Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	FUN19	YAL034C	1242 nt		4.57	□□□□□ -1.68
CAF16	P43569	ISU2	YOR226C	471 nt		4.57	□□□□□ -1.68
CAF16	P43569	RPS10A	YOR293W	318 nt		4.57	□□□□□ -1.68
CAF16	P43569	ARL1	YBR164C	552 nt		4.57	□□□□□ -1.68
CAF16	P43569	CTM1	YHR109W	1758 nt		4.57	□□□□□ -1.68
CAF16	P43569	PGM2	YMR105C	1710 nt		4.57	□□□□□ -1.68
CAF16	P43569	MNT2	YGL257C	1677 nt		4.57	□□□□□ -1.68
CAF16	P43569	ADE12	YNL220W	1302 nt		4.56	□□□□□ -1.68
CAF16	P43569	TAF10	YDR167W	621 nt		4.56	□□□□□ -1.68
CAF16	P43569	HMO1	YDR174W	741 nt		4.56	□□□□□ -1.68
CAF16	P43569	MSW1	YDR268W	1140 nt		4.56	□□□□□ -1.68
CAF16	P43569	YGL214W	YGL214W	486 nt		4.56	□□□□□ -1.68
CAF16	P43569	YIL161W	YIL161W	708 nt		4.56	□□□□□ -1.68
CAF16	P43569	GLO1	YML004C	981 nt		4.56	□□□□□ -1.68
CAF16	P43569	ECM13	YBL043W	774 nt		4.56	□□□□□ -1.68
CAF16	P43569	RPA49	YNL248C	1248 nt		4.56	□□□□□ -1.68
CAF16	P43569	POL30	YBR088C	777 nt		4.56	□□□□□ -1.68
CAF16	P43569	MAG2	YLR427W	2013 nt		4.55	□□□□□ -1.68
CAF16	P43569	MSE1	YOL033W	1611 nt		4.55	□□□□□ -1.68
CAF16	P43569	DNF2	YDR093W	4839 nt		4.55	□□□□□ -1.68
CAF16	P43569	BCP1	YDR361C	852 nt		4.55	□□□□□ -1.68
CAF16	P43569	MST27	YGL051W	705 nt		4.55	□□□□□ -1.68
CAF16	P43569	YGR016W	YGR016W	573 nt		4.55	□□□□□ -1.68
CAF16	P43569	YGR190C	YGR190C	366 nt		4.55	□□□□□ -1.68
CAF16	P43569	SRP40	YKR092C	1221 nt		4.55	□□□□□ -1.68
CAF16	P43569	MST28	YAR033W	705 nt		4.55	□□□□□ -1.68
CAF16	P43569	YAR075W	YAR075W	474 nt		4.55	□□□□□ -1.68
CAF16	P43569	MRPL22	YNL177C	930 nt		4.55	□□□□□ -1.68
CAF16	P43569	YOR379C	YOR379C	339 nt		4.55	□□□□□ -1.68
CAF16	P43569	IDI1	YPL117C	867 nt		4.55	□□□□□ -1.68
CAF16	P43569	YPL199C	YPL199C	723 nt		4.55	□□□□□ -1.68
CAF16	P43569	YCL021W-A	YCL021W-A	378 nt		4.55	□□□□□ -1.68
CAF16	P43569	MTL1	YGR023W	1656 nt		4.54	□□□□□ -1.68
CAF16	P43569	TRF5	YNL299W	1929 nt		4.54	□□□□□ -1.68
CAF16	P43569	SEC59	YMR013C	1560 nt		4.54	□□□□□ -1.68
CAF16	P43569	FCF1	YDR339C	570 nt		4.54	□□□□□ -1.68
CAF16	P43569	MPC3	YGR243W	441 nt		4.54	□□□□□ -1.68
CAF16	P43569	LIN1	YHR156C	1023 nt		4.54	□□□□□ -1.68
CAF16	P43569	SNF8	YPL002C	702 nt		4.54	□□□□□ -1.68
CAF16	P43569	RAD28	YDR030C	1521 nt		4.54	□□□□□ -1.68
CAF16	P43569	DSN1	YIR010W	1731 nt		4.54	□□□□□ -1.68
CAF16	P43569	NGG1	YDR176W	2109 nt		4.54	□□□□□ -1.68
CAF16	P43569	ALR2	YFL050C	2577 nt		4.54	□□□□□ -1.68
CAF16	P43569	HRK1	YOR267C	2280 nt		4.53	□□□□□ -1.68
CAF16	P43569	PTR3	YFR029W	2037 nt		4.53	□□□□□ -1.68
CAF16	P43569	NAM2	YLR382C	2685 nt		4.53	□□□□□ -1.68
CAF16	P43569	BUD27	YFL023W	2391 nt		4.53	□□□□□ -1.68
CAF16	P43569	DPB4	YDR121W	591 nt		4.53	□□□□□ -1.68
CAF16	P43569	YFL019C	YFL019C	354 nt		4.53	□□□□□ -1.68
CAF16	P43569	SNO3	YFL060C	669 nt		4.53	□□□□□ -1.68
CAF16	P43569	COG2	YGR120C	789 nt		4.53	□□□□□ -1.68
CAF16	P43569	YHL002C-A	YHL002C-A	489 nt		4.53	□□□□□ -1.68
CAF16	P43569	YIL024C	YIL024C	570 nt		4.53	□□□□□ -1.68
CAF16	P43569	BUD19	YJL188C	309 nt		4.53	□□□□□ -1.68
CAF16	P43569	MOG1	YJR074W	657 nt		4.53	□□□□□ -1.68
CAF16	P43569	YLR290C	YLR290C	834 nt		4.53	□□□□□ -1.68
CAF16	P43569	COG5	YNL051W	1212 nt		4.53	□□□□□ -1.68
CAF16	P43569	SNO2	YNL334C	669 nt		4.53	□□□□□ -1.68
CAF16	P43569	IZH2	YOL002C	954 nt		4.53	□□□□□ -1.68
CAF16	P43569	BRX1	YOL077C	876 nt		4.53	□□□□□ -1.68
CAF16	P43569	YGK3	YOL128C	1128 nt		4.53	□□□□□ -1.68
CAF16	P43569	YOR032W-A	YOR032W-A	201 nt		4.53	□□□□□ -1.68
CAF16	P43569	YAR1	YPL239W	603 nt		4.53	□□□□□ -1.68
CAF16	P43569	VID22	YLR373C	2706 nt		4.53	□□□□□ -1.68
CAF16	P43569	SWP82	YFL049W	1872 nt		4.53	□□□□□ -1.68
CAF16	P43569	VPS27	YNR006W	1869 nt		4.53	□□□□□ -1.68
CAF16	P43569	RAD16	YBR114W	2373 nt		4.53	□□□□□ -1.68
CAF16	P43569	KAP114	YGL241W	3015 nt		4.52	□□□□□ -1.69
CAF16	P43569	ZPR1	YGR211W	1461 nt		4.52	□□□□□ -1.69
CAF16	P43569	RIM1	YCR028C-A	408 nt		4.52	□□□□□ -1.69
CAF16	P43569	UBC13	YDR092W	462 nt		4.52	□□□□□ -1.69
CAF16	P43569	TVP15	YDR100W	432 nt		4.52	□□□□□ -1.69
CAF16	P43569	RPL34A	YER056C-A	366 nt		4.52	□□□□□ -1.69
CAF16	P43569	TAN1	YGL232W	870 nt		4.52	□□□□□ -1.69
CAF16	P43569	RRP4	YHR069C	1080 nt		4.52	□□□□□ -1.69
CAF16	P43569	YHR180W	YHR180W	492 nt		4.52	□□□□□ -1.69
CAF16	P43569	APQ13	YJL075C	417 nt		4.52	□□□□□ -1.69
CAF16	P43569	FMP33	YJL161W	543 nt		4.52	□□□□□ -1.69
CAF16	P43569	YJR038C	YJR038C	363 nt		4.52	□□□□□ -1.69
CAF16	P43569	YLR222C-A	YLR222C-A	231 nt		4.52	□□□□□ -1.69
CAF16	P43569	YMR310C	YMR310C	954 nt		4.52	□□□□□ -1.69
CAF16	P43569	MPP6	YNR024W	561 nt		4.52	□□□□□ -1.69
CAF16	P43569	MIX23	YBL107C	591 nt		4.52	□□□□□ -1.69
CAF16	P43569	SER1	YOR184W	1188 nt		4.52	□□□□□ -1.69
CAF16	P43569	YBR071W	YBR071W	636 nt		4.52	□□□□□ -1.69
CAF16	P43569	YPR078C	YPR078C	1119 nt		4.52	□□□□□ -1.69
CAF16	P43569	PIN3	YPR154W	648 nt		4.52	□□□□□ -1.69
CAF16	P43569	YPL109C	YPL109C	1974 nt		4.52	□□□□□ -1.69
CAF16	P43569	AGE1	YDR524C	1449 nt		4.52	□□□□□ -1.69
CAF16	P43569	PHO5	YBR093C	1404 nt		4.52	□□□□□ -1.69
CAF16	P43569	RTC5	YOR118W	1704 nt		4.52	□□□□□ -1.69
CAF16	P43569	TAF8	YML114C	1533 nt		4.51	□□□□□ -1.69
CAF16	P43569	CRT10	YOL063C	2874 nt		4.51	□□□□□ -1.69
CAF16	P43569	OCA6	YDR067C	675 nt		4.51	□□□□□ -1.69
CAF16	P43569	KEI1	YDR367W	666 nt		4.51	□□□□□ -1.69
CAF16	P43569	MPO1	YGL010W	525 nt		4.51	□□□□□ -1.69
CAF16	P43569	RNA15	YGL044C	891 nt		4.51	□□□□□ -1.69
CAF16	P43569	RGS2	YOR107W	930 nt		4.51	□□□□□ -1.69
CAF16	P43569	YOR186W	YOR186W	435 nt		4.51	□□□□□ -1.69
CAF16	P43569	POF1	YCL047C	777 nt		4.51	□□□□□ -1.69

Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms