Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 AC087239.1-201ENST00000622671 572 ntBASIC21.59■■□□□ 1.05
CTSKP43235 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTSKP43235 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CTSKP43235 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.59■■□□□ 1.05
CTSKP43235 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CTSKP43235 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.58■■□□□ 1.05
CTSKP43235 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSKP43235 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSKP43235 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CTSKP43235 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSKP43235 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTSKP43235 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.58■■□□□ 1.04
CTSKP43235 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTSKP43235 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTSKP43235 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTSKP43235 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTSKP43235 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTSKP43235 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CTSKP43235 KRT19P1-201ENST00000405746 1186 ntBASIC21.57■■□□□ 1.04
CTSKP43235 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.57■■□□□ 1.04
CTSKP43235 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.57■■□□□ 1.04
CTSKP43235 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.57■■□□□ 1.04
CTSKP43235 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.57■■□□□ 1.04
CTSKP43235 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CTSKP43235 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTSKP43235 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTSKP43235 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSKP43235 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.56■■□□□ 1.04
CTSKP43235 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTSKP43235 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSKP43235 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CTSKP43235 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSKP43235 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.56■■□□□ 1.04
CTSKP43235 AC026185.1-201ENST00000445748 174 ntBASIC21.56■■□□□ 1.04
CTSKP43235 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTSKP43235 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.56■■□□□ 1.04
CTSKP43235 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.56■■□□□ 1.04
CTSKP43235 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.56■■□□□ 1.04
CTSKP43235 BID-214ENST00000617586 542 ntTSL 5 BASIC21.56■■□□□ 1.04
CTSKP43235 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.56■■□□□ 1.04
CTSKP43235 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSKP43235 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSKP43235 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTSKP43235 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTSKP43235 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTSKP43235 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CTSKP43235 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.55■■□□□ 1.04
CTSKP43235 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.55■■□□□ 1.04
CTSKP43235 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CTSKP43235 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTSKP43235 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTSKP43235 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTSKP43235 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.55■■□□□ 1.04
CTSKP43235 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
CTSKP43235 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTSKP43235 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.55■■□□□ 1.04
CTSKP43235 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTSKP43235 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTSKP43235 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.54■■□□□ 1.04
CTSKP43235 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTSKP43235 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTSKP43235 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTSKP43235 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTSKP43235 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.54■■□□□ 1.04
CTSKP43235 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSKP43235 AL353803.4-201ENST00000565882 1934 ntBASIC21.53■■□□□ 1.04
CTSKP43235 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.53■■□□□ 1.04
CTSKP43235 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.53■■□□□ 1.04
CTSKP43235 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.53■■□□□ 1.04
CTSKP43235 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.53■■□□□ 1.04
CTSKP43235 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.53■■□□□ 1.04
CTSKP43235 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.53■■□□□ 1.04
CTSKP43235 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTSKP43235 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.53■■□□□ 1.04
CTSKP43235 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTSKP43235 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CTSKP43235 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTSKP43235 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CTSKP43235 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
CTSKP43235 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.52■■□□□ 1.04
CTSKP43235 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSKP43235 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTSKP43235 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.52■■□□□ 1.04
CTSKP43235 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CTSKP43235 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSKP43235 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.52■■□□□ 1.04
CTSKP43235 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.52■■□□□ 1.04
CTSKP43235 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.52■■□□□ 1.04
CTSKP43235 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.52■■□□□ 1.04
CTSKP43235 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTSKP43235 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.52■■□□□ 1.04
CTSKP43235 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.52■■□□□ 1.04
CTSKP43235 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSKP43235 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTSKP43235 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTSKP43235 OXCT2P1-201ENST00000447263 1535 ntBASIC21.51■■□□□ 1.03
CTSKP43235 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CTSKP43235 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTSKP43235 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTSKP43235 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms