Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.92■□□□□ 0.14
CKS2P33552 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.92■□□□□ 0.14
CKS2P33552 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.91■□□□□ 0.14
CKS2P33552 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.91■□□□□ 0.14
CKS2P33552 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CKS2P33552 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.91■□□□□ 0.14
CKS2P33552 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS2P33552 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.91■□□□□ 0.14
CKS2P33552 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.91■□□□□ 0.14
CKS2P33552 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.91■□□□□ 0.14
CKS2P33552 AC087393.1-201ENST00000582896 145 ntBASIC15.91■□□□□ 0.14
CKS2P33552 AC133552.2-201ENST00000619106 1032 ntBASIC15.91■□□□□ 0.14
CKS2P33552 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CKS2P33552 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CKS2P33552 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS2P33552 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS2P33552 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CKS2P33552 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS2P33552 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS2P33552 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS2P33552 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS2P33552 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CKS2P33552 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CKS2P33552 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.9■□□□□ 0.14
CKS2P33552 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS2P33552 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.9■□□□□ 0.14
CKS2P33552 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CKS2P33552 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS2P33552 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS2P33552 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS2P33552 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CKS2P33552 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CKS2P33552 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS2P33552 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CKS2P33552 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CKS2P33552 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.9■□□□□ 0.14
CKS2P33552 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS2P33552 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS2P33552 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.89■□□□□ 0.13
CKS2P33552 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.89■□□□□ 0.13
CKS2P33552 LINC01521-201ENST00000504184 1943 ntBASIC15.89■□□□□ 0.13
CKS2P33552 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CKS2P33552 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CKS2P33552 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.89■□□□□ 0.13
CKS2P33552 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.89■□□□□ 0.13
CKS2P33552 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKS2P33552 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.88■□□□□ 0.13
CKS2P33552 AC009831.1-201ENST00000580420 1582 ntBASIC15.88■□□□□ 0.13
CKS2P33552 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
CKS2P33552 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.88■□□□□ 0.13
CKS2P33552 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CKS2P33552 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS2P33552 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CKS2P33552 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CKS2P33552 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.87■□□□□ 0.13
CKS2P33552 ABHD17AP4-201ENST00000411545 909 ntBASIC15.87■□□□□ 0.13
CKS2P33552 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CKS2P33552 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CKS2P33552 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CKS2P33552 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.87■□□□□ 0.13
CKS2P33552 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS2P33552 AL157384.1-201ENST00000445995 2473 ntBASIC15.87■□□□□ 0.13
CKS2P33552 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.87■□□□□ 0.13
CKS2P33552 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CKS2P33552 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms