Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 HXT15YDL245C 1704 nt5.04□□□□□ -1.6
PUB1P32588 HXT16YJR158W 1704 nt5.04□□□□□ -1.6
PUB1P32588 CAD1YDR423C 1230 nt5.04□□□□□ -1.6
PUB1P32588 PUG1YER185W 912 nt5.04□□□□□ -1.6
PUB1P32588 LIF1YGL090W 1266 nt5.04□□□□□ -1.6
PUB1P32588 YKE4YIL023C 1041 nt5.04□□□□□ -1.6
PUB1P32588 SOP4YJL192C 705 nt5.04□□□□□ -1.6
PUB1P32588 APN1YKL114C 1104 nt5.04□□□□□ -1.6
PUB1P32588 GEP5YLR091W 882 nt5.04□□□□□ -1.6
PUB1P32588 FAA4YMR246W 2085 nt5.04□□□□□ -1.6
PUB1P32588 SCT1YBL011W 2280 nt5.04□□□□□ -1.6
PUB1P32588 AZR1YGR224W 1842 nt5.04□□□□□ -1.6
PUB1P32588 YML020WYML020W 1995 nt5.04□□□□□ -1.6
PUB1P32588 MKK1YOR231W 1527 nt5.03□□□□□ -1.6 RIP-Chip
PUB1P32588 EMP46YLR080W 1335 nt5.03□□□□□ -1.6
PUB1P32588 RRP4YHR069C 1080 nt5.03□□□□□ -1.6
PUB1P32588 YIL025CYIL025C 375 nt5.03□□□□□ -1.6
PUB1P32588 YLR462WYLR462W 609 nt5.03□□□□□ -1.6 RIP-Chip
PUB1P32588 YPR074W-AYPR074W-A 171 nt5.03□□□□□ -1.6
PUB1P32588 YPR202WYPR202W 717 nt5.03□□□□□ -1.6
PUB1P32588 VTC2YFL004W 2487 nt5.03□□□□□ -1.6
PUB1P32588 HIS7YBR248C 1659 nt5.02□□□□□ -1.61
PUB1P32588 ACA1YER045C 1470 nt5.02□□□□□ -1.61 RIP-Chip
PUB1P32588 YDR391CYDR391C 699 nt5.02□□□□□ -1.61
PUB1P32588 DFM1YDR411C 1026 nt5.02□□□□□ -1.61 RIP-Chip
PUB1P32588 SLD5YDR489W 885 nt5.02□□□□□ -1.61 RIP-Chip
PUB1P32588 AAD16YFL057C 459 nt5.02□□□□□ -1.61 RIP-Chip
PUB1P32588 Q0143Q0143 153 nt5.02□□□□□ -1.61
PUB1P32588 YIL175WYIL175W 318 nt5.02□□□□□ -1.61
PUB1P32588 CPR3YML078W 549 nt5.02□□□□□ -1.61 RIP-Chip
PUB1P32588 AAD15YOL165C 432 nt5.02□□□□□ -1.61
PUB1P32588 SYC1YOR179C 567 nt5.02□□□□□ -1.61 RIP-Chip
PUB1P32588 JIP4YDR475C 2631 nt5.02□□□□□ -1.61
PUB1P32588 YEL077CYEL077C 3834 nt5.02□□□□□ -1.61
PUB1P32588 PDC1YLR044C 1692 nt5.02□□□□□ -1.61
PUB1P32588 YAP1801YHR161C 1914 nt5.01□□□□□ -1.61
PUB1P32588 JJJ1YNL227C 1773 nt5.01□□□□□ -1.61
PUB1P32588 MNN2YBR015C 1794 nt5.01□□□□□ -1.61 RIP-Chip
PUB1P32588 RCM1YNL022C 1473 nt5.01□□□□□ -1.61
PUB1P32588 GAS4YOL132W 1416 nt5.01□□□□□ -1.61
PUB1P32588 GLO2YDR272W 825 nt5.01□□□□□ -1.61
PUB1P32588 YDR535CYDR535C 501 nt5.01□□□□□ -1.61
PUB1P32588 CDC43YGL155W 1131 nt5.01□□□□□ -1.61
PUB1P32588 RPL15BYMR121C 615 nt5.01□□□□□ -1.61
PUB1P32588 ATE1YGL017W 1512 nt5.01□□□□□ -1.61
PUB1P32588 TEF1YPR080W 1377 nt5.01□□□□□ -1.61
PUB1P32588 TEF2YBR118W 1377 nt5.01□□□□□ -1.61 RIP-Chip
PUB1P32588 SNT2YGL131C 4212 nt5.01□□□□□ -1.61
PUB1P32588 LDB19YOR322C 2457 nt5□□□□□ -1.61
PUB1P32588 RXT3YDL076C 885 nt5□□□□□ -1.61
PUB1P32588 HIS6YIL020C 786 nt5□□□□□ -1.61 RIP-Chip
PUB1P32588 YIL029CYIL029C 429 nt5□□□□□ -1.61
PUB1P32588 IES3YLR052W 753 nt5□□□□□ -1.61
PUB1P32588 YLR296WYLR296W 327 nt5□□□□□ -1.61
PUB1P32588 YML047W-AYML047W-A 366 nt5□□□□□ -1.61
PUB1P32588 YMR031W-AYMR031W-A 327 nt5□□□□□ -1.61
PUB1P32588 JLP2YMR132C 627 nt5□□□□□ -1.61
PUB1P32588 YOR387CYOR387C 621 nt5□□□□□ -1.61
PUB1P32588 ERI1YPL096C-A 207 nt5□□□□□ -1.61 RIP-Chip
PUB1P32588 PIF1YML061C 2580 nt5□□□□□ -1.61
PUB1P32588 UBP9YER098W 2265 nt4.99□□□□□ -1.61
PUB1P32588 SIA1YOR137C 1869 nt4.99□□□□□ -1.61 RIP-Chip
PUB1P32588 SSZ1YHR064C 1617 nt4.99□□□□□ -1.61
PUB1P32588 YDL022C-AYDL022C-A 249 nt4.99□□□□□ -1.61
PUB1P32588 GUK1YDR454C 564 nt4.99□□□□□ -1.61
PUB1P32588 CHZ1YER030W 462 nt4.99□□□□□ -1.61
PUB1P32588 YGR069WYGR069W 336 nt4.99□□□□□ -1.61
PUB1P32588 VMA22YHR060W 546 nt4.99□□□□□ -1.61
PUB1P32588 GVP36YIL041W 981 nt4.99□□□□□ -1.61 RIP-Chip
PUB1P32588 YIR023C-AYIR023C-A 324 nt4.99□□□□□ -1.61
PUB1P32588 YKR041WYKR041W 753 nt4.99□□□□□ -1.61
PUB1P32588 COQ10YOL008W 624 nt4.99□□□□□ -1.61 RIP-Chip
PUB1P32588 CAT5YOR125C 702 nt4.99□□□□□ -1.61
PUB1P32588 ATG12YBR217W 561 nt4.99□□□□□ -1.61
PUB1P32588 MDM38YOL027C 1722 nt4.99□□□□□ -1.61
PUB1P32588 VPS17YOR132W 1656 nt4.99□□□□□ -1.61
PUB1P32588 TRK2YKR050W 2670 nt4.98□□□□□ -1.61
PUB1P32588 YCL065WYCL065W 369 nt4.98□□□□□ -1.61
PUB1P32588 MAM33YIL070C 801 nt4.98□□□□□ -1.61 RIP-Chip
PUB1P32588 DAL3YIR032C 588 nt4.98□□□□□ -1.61
PUB1P32588 YJL133C-AYJL133C-A 225 nt4.98□□□□□ -1.61 RIP-Chip
PUB1P32588 ARC18YLR370C 537 nt4.98□□□□□ -1.61
PUB1P32588 YMR153C-AYMR153C-A 336 nt4.98□□□□□ -1.61
PUB1P32588 YBL044WYBL044W 369 nt4.98□□□□□ -1.61
PUB1P32588 MCK1YNL307C 1128 nt4.98□□□□□ -1.61 RIP-Chip
PUB1P32588 ECM33YBR078W 1290 nt4.98□□□□□ -1.61 RIP-Chip
PUB1P32588 ISN1YOR155C 1353 nt4.98□□□□□ -1.61
PUB1P32588 HCA4YJL033W 2313 nt4.98□□□□□ -1.61
PUB1P32588 UGA2YBR006W 1494 nt4.98□□□□□ -1.61
PUB1P32588 YIR007WYIR007W 2295 nt4.98□□□□□ -1.61
PUB1P32588 ABZ1YNR033W 2364 nt4.98□□□□□ -1.61
PUB1P32588 THI20YOL055C 1656 nt4.97□□□□□ -1.61
PUB1P32588 SWF1YDR126W 1011 nt4.97□□□□□ -1.61
PUB1P32588 YRA1YDR381W 681 nt4.97□□□□□ -1.61
PUB1P32588 BNA7YDR428C 786 nt4.97□□□□□ -1.61
PUB1P32588 APA2YDR530C 978 nt4.97□□□□□ -1.61
PUB1P32588 THO1YER063W 657 nt4.97□□□□□ -1.61
PUB1P32588 GET1YGL020C 708 nt4.97□□□□□ -1.61
PUB1P32588 SLX9YGR081C 633 nt4.97□□□□□ -1.61
PUB1P32588 HIT1YJR055W 495 nt4.97□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms