Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RXRBP28702 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.02■■■□□ 2.24
RXRBP28702 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RXRBP28702 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RXRBP28702 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RXRBP28702 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
RXRBP28702 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC29.02■■■□□ 2.24
RXRBP28702 ABHD17AP6-201ENST00000458502 1044 ntBASIC29.02■■■□□ 2.24
RXRBP28702 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RXRBP28702 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC29.02■■■□□ 2.24
RXRBP28702 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC29.02■■■□□ 2.24
RXRBP28702 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RXRBP28702 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
RXRBP28702 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RXRBP28702 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.24
RXRBP28702 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
RXRBP28702 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
RXRBP28702 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC29.01■■■□□ 2.23
RXRBP28702 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RXRBP28702 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC29.01■■■□□ 2.23
RXRBP28702 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC29.01■■■□□ 2.23
RXRBP28702 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC29.01■■■□□ 2.23
RXRBP28702 WDR88-203ENST00000592765 651 ntTSL 5 BASIC29.01■■■□□ 2.23
RXRBP28702 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
RXRBP28702 AC009237.3-201ENST00000393279 1427 ntBASIC29.01■■■□□ 2.23
RXRBP28702 AC144652.1-201ENST00000609974 1624 ntBASIC29.01■■■□□ 2.23
RXRBP28702 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29■■■□□ 2.23
RXRBP28702 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC29■■■□□ 2.23
RXRBP28702 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC29■■■□□ 2.23
RXRBP28702 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC29■■■□□ 2.23
RXRBP28702 AC007322.4-201ENST00000509611 723 ntBASIC29■■■□□ 2.23
RXRBP28702 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC29■■■□□ 2.23
RXRBP28702 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC29■■■□□ 2.23
RXRBP28702 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC29■■■□□ 2.23
RXRBP28702 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29■■■□□ 2.23
RXRBP28702 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
RXRBP28702 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC28.99■■■□□ 2.23
RXRBP28702 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
RXRBP28702 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RXRBP28702 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC28.99■■■□□ 2.23
RXRBP28702 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RXRBP28702 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC28.99■■■□□ 2.23
RXRBP28702 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
RXRBP28702 RPPH1-201ENST00000516869 333 ntBASIC28.99■■■□□ 2.23
RXRBP28702 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC28.99■■■□□ 2.23
RXRBP28702 RNF121-214ENST00000533380 870 ntTSL 3 BASIC28.99■■■□□ 2.23
RXRBP28702 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RXRBP28702 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.98■■■□□ 2.23
RXRBP28702 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.98■■■□□ 2.23
RXRBP28702 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.98■■■□□ 2.23
RXRBP28702 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RXRBP28702 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
RXRBP28702 MFF-207ENST00000409565 1548 ntTSL 2 BASIC28.98■■■□□ 2.23
RXRBP28702 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC28.97■■■□□ 2.23
RXRBP28702 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC28.97■■■□□ 2.23
RXRBP28702 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC28.97■■■□□ 2.23
RXRBP28702 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
RXRBP28702 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RXRBP28702 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC28.97■■■□□ 2.23
RXRBP28702 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
RXRBP28702 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC28.97■■■□□ 2.23
RXRBP28702 OXCT2P1-201ENST00000447263 1535 ntBASIC28.97■■■□□ 2.23
RXRBP28702 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
RXRBP28702 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC28.96■■■□□ 2.23
RXRBP28702 AC010141.2-201ENST00000452426 721 ntBASIC28.96■■■□□ 2.23
RXRBP28702 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC28.96■■■□□ 2.23
RXRBP28702 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC28.96■■■□□ 2.23
RXRBP28702 PLLP-204ENST00000569059 665 ntTSL 3 BASIC28.96■■■□□ 2.23
RXRBP28702 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC28.96■■■□□ 2.23
RXRBP28702 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC28.96■■■□□ 2.23
RXRBP28702 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
RXRBP28702 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.96■■■□□ 2.23
RXRBP28702 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.96■■■□□ 2.23
RXRBP28702 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.96■■■□□ 2.23
RXRBP28702 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
RXRBP28702 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
RXRBP28702 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
RXRBP28702 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
RXRBP28702 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RXRBP28702 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
RXRBP28702 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
RXRBP28702 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC28.95■■■□□ 2.22
RXRBP28702 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC28.95■■■□□ 2.22
RXRBP28702 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC28.95■■■□□ 2.22
RXRBP28702 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RXRBP28702 AC139426.1-201ENST00000568218 2529 ntBASIC28.94■■■□□ 2.22
RXRBP28702 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
RXRBP28702 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
RXRBP28702 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RXRBP28702 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC28.94■■■□□ 2.22
RXRBP28702 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
RXRBP28702 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
RXRBP28702 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC28.94■■■□□ 2.22
RXRBP28702 NT5C-211ENST00000582170 653 ntTSL 3 BASIC28.94■■■□□ 2.22
RXRBP28702 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC28.94■■■□□ 2.22
RXRBP28702 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.94■■■□□ 2.22
RXRBP28702 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RXRBP28702 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RXRBP28702 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
RXRBP28702 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms