Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC087742.1-201ENST00000575880 1738 ntBASIC21.22■□□□□ 0.99
VARSP26640 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
VARSP26640 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
VARSP26640 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VARSP26640 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VARSP26640 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.22■□□□□ 0.99
VARSP26640 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VARSP26640 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VARSP26640 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VARSP26640 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
VARSP26640 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.21■□□□□ 0.99
VARSP26640 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.21■□□□□ 0.99
VARSP26640 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VARSP26640 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VARSP26640 SERBP1P1-201ENST00000396021 1160 ntBASIC21.21■□□□□ 0.99
VARSP26640 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.21■□□□□ 0.99
VARSP26640 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.21■□□□□ 0.99
VARSP26640 AC026271.2-201ENST00000428091 497 ntBASIC21.21■□□□□ 0.99
VARSP26640 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VARSP26640 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
VARSP26640 AC092171.4-201ENST00000609130 632 ntBASIC21.21■□□□□ 0.99
VARSP26640 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VARSP26640 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VARSP26640 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.2■□□□□ 0.99
VARSP26640 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.2■□□□□ 0.98
VARSP26640 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARSP26640 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARSP26640 SYT6-210ENST00000641643 1587 ntBASIC21.2■□□□□ 0.98
VARSP26640 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARSP26640 AC139530.1-201ENST00000575312 1977 ntBASIC21.2■□□□□ 0.98
VARSP26640 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.2■□□□□ 0.98
VARSP26640 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VARSP26640 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.2■□□□□ 0.98
VARSP26640 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARSP26640 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARSP26640 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARSP26640 LINC01960-201ENST00000563759 1884 ntBASIC21.2■□□□□ 0.98
VARSP26640 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VARSP26640 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VARSP26640 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.19■□□□□ 0.98
VARSP26640 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.19■□□□□ 0.98
VARSP26640 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.19■□□□□ 0.98
VARSP26640 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VARSP26640 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VARSP26640 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VARSP26640 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VARSP26640 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VARSP26640 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.19■□□□□ 0.98
VARSP26640 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VARSP26640 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.18■□□□□ 0.98
VARSP26640 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
VARSP26640 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.18■□□□□ 0.98
VARSP26640 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
VARSP26640 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.18■□□□□ 0.98
VARSP26640 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
VARSP26640 AL031432.3-201ENST00000607698 485 ntBASIC21.18■□□□□ 0.98
VARSP26640 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.18■□□□□ 0.98
VARSP26640 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VARSP26640 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARSP26640 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARSP26640 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARSP26640 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARSP26640 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
VARSP26640 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VARSP26640 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VARSP26640 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARSP26640 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
VARSP26640 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARSP26640 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VARSP26640 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
VARSP26640 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VARSP26640 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VARSP26640 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARSP26640 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VARSP26640 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
VARSP26640 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.16■□□□□ 0.98
VARSP26640 AC092053.2-201ENST00000640557 1818 ntBASIC21.16■□□□□ 0.98
VARSP26640 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARSP26640 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.16■□□□□ 0.98
VARSP26640 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.16■□□□□ 0.98
VARSP26640 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARSP26640 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.16■□□□□ 0.98
VARSP26640 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARSP26640 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARSP26640 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARSP26640 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VARSP26640 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms