Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SRMP19623 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.9■□□□□ 0.62
SRMP19623 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRMP19623 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRMP19623 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRMP19623 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SRMP19623 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRMP19623 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRMP19623 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.89■□□□□ 0.62
SRMP19623 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRMP19623 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SRMP19623 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.89■□□□□ 0.62
SRMP19623 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.89■□□□□ 0.61
SRMP19623 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.89■□□□□ 0.61
SRMP19623 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.89■□□□□ 0.61
SRMP19623 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SRMP19623 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.89■□□□□ 0.61
SRMP19623 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRMP19623 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.88■□□□□ 0.61
SRMP19623 FEM1AP4-201ENST00000443167 1987 ntBASIC18.88■□□□□ 0.61
SRMP19623 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
SRMP19623 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRMP19623 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.88■□□□□ 0.61
SRMP19623 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRMP19623 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRMP19623 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.88■□□□□ 0.61
SRMP19623 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SRMP19623 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.88■□□□□ 0.61
SRMP19623 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.88■□□□□ 0.61
SRMP19623 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRMP19623 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRMP19623 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRMP19623 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.87■□□□□ 0.61
SRMP19623 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRMP19623 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
SRMP19623 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRMP19623 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRMP19623 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRMP19623 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRMP19623 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.87■□□□□ 0.61
SRMP19623 AC137630.3-201ENST00000607245 391 ntBASIC18.87■□□□□ 0.61
SRMP19623 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRMP19623 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRMP19623 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.87■□□□□ 0.61
SRMP19623 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRMP19623 AF106564.1-201ENST00000607058 2553 ntBASIC18.87■□□□□ 0.61
SRMP19623 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.87■□□□□ 0.61
SRMP19623 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SRMP19623 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SRMP19623 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SRMP19623 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.86■□□□□ 0.61
SRMP19623 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.86■□□□□ 0.61
SRMP19623 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRMP19623 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SRMP19623 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.85■□□□□ 0.61
SRMP19623 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SRMP19623 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SRMP19623 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.85■□□□□ 0.61
SRMP19623 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.85■□□□□ 0.61
SRMP19623 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.85■□□□□ 0.61
SRMP19623 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.85■□□□□ 0.61
SRMP19623 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.85■□□□□ 0.61
SRMP19623 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRMP19623 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SRMP19623 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SRMP19623 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.84■□□□□ 0.61
SRMP19623 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRMP19623 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms