Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.97■□□□□ 0.63
UBCP0CG48 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBCP0CG48 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.97■□□□□ 0.63
UBCP0CG48 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBCP0CG48 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.97■□□□□ 0.63
UBCP0CG48 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBCP0CG48 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBCP0CG48 AL137060.1-201ENST00000618151 2648 ntBASIC18.97■□□□□ 0.63
UBCP0CG48 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBCP0CG48 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBCP0CG48 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBCP0CG48 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.96■□□□□ 0.63
UBCP0CG48 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.96■□□□□ 0.63
UBCP0CG48 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBCP0CG48 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBCP0CG48 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.96■□□□□ 0.63
UBCP0CG48 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.96■□□□□ 0.63
UBCP0CG48 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBCP0CG48 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBCP0CG48 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBCP0CG48 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBCP0CG48 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBCP0CG48 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.95■□□□□ 0.62
UBCP0CG48 FAM99A-202ENST00000538190 1989 ntBASIC18.95■□□□□ 0.62
UBCP0CG48 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.95■□□□□ 0.62
UBCP0CG48 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBCP0CG48 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBCP0CG48 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
UBCP0CG48 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBCP0CG48 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.95■□□□□ 0.62
UBCP0CG48 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.95■□□□□ 0.62
UBCP0CG48 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBCP0CG48 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBCP0CG48 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBCP0CG48 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBCP0CG48 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBCP0CG48 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UBCP0CG48 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBCP0CG48 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 AL117332.1-201ENST00000622628 974 ntBASIC18.94■□□□□ 0.62
UBCP0CG48 AC241377.3-202ENST00000626088 1088 ntBASIC18.94■□□□□ 0.62
UBCP0CG48 AC241585.3-202ENST00000628937 1088 ntBASIC18.94■□□□□ 0.62
UBCP0CG48 AC245100.8-202ENST00000629247 1058 ntBASIC18.94■□□□□ 0.62
UBCP0CG48 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.94■□□□□ 0.62
UBCP0CG48 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBCP0CG48 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBCP0CG48 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBCP0CG48 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
UBCP0CG48 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
UBCP0CG48 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBCP0CG48 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBCP0CG48 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.93■□□□□ 0.62
UBCP0CG48 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBCP0CG48 RARRES2P1-201ENST00000474487 481 ntBASIC18.93■□□□□ 0.62
UBCP0CG48 AC009299.2-201ENST00000482477 511 ntBASIC18.93■□□□□ 0.62
UBCP0CG48 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.93■□□□□ 0.62
UBCP0CG48 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBCP0CG48 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
UBCP0CG48 MIR6724-1-201ENST00000616420 92 ntBASIC18.93■□□□□ 0.62
UBCP0CG48 MIR6724-2-201ENST00000616483 92 ntBASIC18.93■□□□□ 0.62
UBCP0CG48 MIR6724-4-201ENST00000617390 92 ntBASIC18.93■□□□□ 0.62
UBCP0CG48 MIR6724-3-201ENST00000622482 92 ntBASIC18.93■□□□□ 0.62
UBCP0CG48 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBCP0CG48 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBCP0CG48 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBCP0CG48 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.93■□□□□ 0.62
UBCP0CG48 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBCP0CG48 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
UBCP0CG48 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.92■□□□□ 0.62
UBCP0CG48 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.92■□□□□ 0.62
UBCP0CG48 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBCP0CG48 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBCP0CG48 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBCP0CG48 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBCP0CG48 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
UBCP0CG48 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBCP0CG48 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
UBCP0CG48 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBCP0CG48 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBCP0CG48 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBCP0CG48 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.91■□□□□ 0.62
UBCP0CG48 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.91■□□□□ 0.62
UBCP0CG48 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBCP0CG48 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBCP0CG48 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UBCP0CG48 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBCP0CG48 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBCP0CG48 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms