Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MMP2P08253 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MMP2P08253 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MMP2P08253 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
MMP2P08253 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MMP2P08253 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
MMP2P08253 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
MMP2P08253 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MMP2P08253 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MMP2P08253 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.94■■□□□ 1.1
MMP2P08253 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.94■■□□□ 1.1
MMP2P08253 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.94■■□□□ 1.1
MMP2P08253 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
MMP2P08253 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP2P08253 TSPY26P-201ENST00000476365 1326 ntBASIC21.94■■□□□ 1.1
MMP2P08253 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.94■■□□□ 1.1
MMP2P08253 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
MMP2P08253 AC092053.2-201ENST00000640557 1818 ntBASIC21.94■■□□□ 1.1
MMP2P08253 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP2P08253 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
MMP2P08253 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP2P08253 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MMP2P08253 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MMP2P08253 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MMP2P08253 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
MMP2P08253 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.93■■□□□ 1.1
MMP2P08253 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.93■■□□□ 1.1
MMP2P08253 AC079834.2-201ENST00000609776 1949 ntBASIC21.93■■□□□ 1.1
MMP2P08253 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MMP2P08253 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MMP2P08253 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
MMP2P08253 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MMP2P08253 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
MMP2P08253 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP2P08253 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MMP2P08253 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.92■■□□□ 1.1
MMP2P08253 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MMP2P08253 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP2P08253 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.92■■□□□ 1.1
MMP2P08253 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.92■■□□□ 1.1
MMP2P08253 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.92■■□□□ 1.1
MMP2P08253 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MMP2P08253 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.92■■□□□ 1.1
MMP2P08253 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
MMP2P08253 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP2P08253 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP2P08253 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP2P08253 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.92■■□□□ 1.1
MMP2P08253 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MMP2P08253 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MMP2P08253 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MMP2P08253 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.91■■□□□ 1.1
MMP2P08253 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MMP2P08253 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MMP2P08253 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MMP2P08253 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
MMP2P08253 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MMP2P08253 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.91■■□□□ 1.1
MMP2P08253 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
MMP2P08253 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP2P08253 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MMP2P08253 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.9■■□□□ 1.1
MMP2P08253 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
MMP2P08253 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
MMP2P08253 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP2P08253 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MMP2P08253 OR7E47P-201ENST00000546390 1422 ntBASIC21.89■■□□□ 1.1
MMP2P08253 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.89■■□□□ 1.1
MMP2P08253 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
MMP2P08253 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MMP2P08253 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.89■■□□□ 1.09
MMP2P08253 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.89■■□□□ 1.09
MMP2P08253 SMUG1P1-201ENST00000590640 811 ntBASIC21.89■■□□□ 1.09
MMP2P08253 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.89■■□□□ 1.09
MMP2P08253 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP2P08253 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP2P08253 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
MMP2P08253 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP2P08253 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
MMP2P08253 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.88■■□□□ 1.09
MMP2P08253 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.88■■□□□ 1.09
MMP2P08253 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.88■■□□□ 1.09
MMP2P08253 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.88■■□□□ 1.09
MMP2P08253 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MMP2P08253 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP2P08253 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MMP2P08253 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.88■■□□□ 1.09
MMP2P08253 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.88■■□□□ 1.09
MMP2P08253 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MMP2P08253 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MMP2P08253 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MMP2P08253 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.87■■□□□ 1.09
MMP2P08253 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.87■■□□□ 1.09
MMP2P08253 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.87■■□□□ 1.09
MMP2P08253 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MMP2P08253 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.87■■□□□ 1.09
MMP2P08253 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MMP2P08253 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.87■■□□□ 1.09
MMP2P08253 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.87■■□□□ 1.09
MMP2P08253 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms