Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2ABP04908 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2ABP04908 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2ABP04908 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2ABP04908 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2ABP04908 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST1H2ABP04908 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2ABP04908 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.69■□□□□ 0.74
HIST1H2ABP04908 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 CA15P2-201ENST00000611168 834 ntBASIC19.68■□□□□ 0.74
HIST1H2ABP04908 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.68■□□□□ 0.74
HIST1H2ABP04908 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2ABP04908 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 C11orf96-202ENST00000528572 1834 ntBASIC19.67■□□□□ 0.74
HIST1H2ABP04908 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 MIR3181-201ENST00000578512 73 ntBASIC19.67■□□□□ 0.74
HIST1H2ABP04908 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H2ABP04908 AC137767.1-201ENST00000602918 1920 ntBASIC19.66■□□□□ 0.74
HIST1H2ABP04908 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 DUX4L19-201ENST00000557448 1267 ntBASIC19.66■□□□□ 0.74
HIST1H2ABP04908 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 AL512631.2-201ENST00000604634 923 ntBASIC19.66■□□□□ 0.74
HIST1H2ABP04908 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2ABP04908 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HIST1H2ABP04908 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2ABP04908 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HIST1H2ABP04908 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2ABP04908 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2ABP04908 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2ABP04908 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2ABP04908 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms