Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPN1SWP03999 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
OPN1SWP03999 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.22■□□□□ 0.83
OPN1SWP03999 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OPN1SWP03999 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPN1SWP03999 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OPN1SWP03999 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPN1SWP03999 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPN1SWP03999 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPN1SWP03999 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.21■□□□□ 0.83
OPN1SWP03999 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
OPN1SWP03999 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPN1SWP03999 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
OPN1SWP03999 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OPN1SWP03999 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
OPN1SWP03999 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.2■□□□□ 0.82
OPN1SWP03999 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 UNC93B8-201ENST00000511903 705 ntBASIC20.2■□□□□ 0.82
OPN1SWP03999 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.2■□□□□ 0.82
OPN1SWP03999 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.2■□□□□ 0.82
OPN1SWP03999 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.2■□□□□ 0.82
OPN1SWP03999 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.2■□□□□ 0.82
OPN1SWP03999 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OPN1SWP03999 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.19■□□□□ 0.82
OPN1SWP03999 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
OPN1SWP03999 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
OPN1SWP03999 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.19■□□□□ 0.82
OPN1SWP03999 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
OPN1SWP03999 AL499627.2-201ENST00000606283 725 ntBASIC20.19■□□□□ 0.82
OPN1SWP03999 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
OPN1SWP03999 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
OPN1SWP03999 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.19■□□□□ 0.82
OPN1SWP03999 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OPN1SWP03999 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
OPN1SWP03999 AC005229.4-201ENST00000610085 2198 ntBASIC20.18■□□□□ 0.82
OPN1SWP03999 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.18■□□□□ 0.82
OPN1SWP03999 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
OPN1SWP03999 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.18■□□□□ 0.82
OPN1SWP03999 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
OPN1SWP03999 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.18■□□□□ 0.82
OPN1SWP03999 AL117332.1-201ENST00000622628 974 ntBASIC20.18■□□□□ 0.82
OPN1SWP03999 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.18■□□□□ 0.82
OPN1SWP03999 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.18■□□□□ 0.82
OPN1SWP03999 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.18■□□□□ 0.82
OPN1SWP03999 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.18■□□□□ 0.82
OPN1SWP03999 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.17■□□□□ 0.82
OPN1SWP03999 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
OPN1SWP03999 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.17■□□□□ 0.82
OPN1SWP03999 MIR6724-1-201ENST00000616420 92 ntBASIC20.17■□□□□ 0.82
OPN1SWP03999 MIR6724-2-201ENST00000616483 92 ntBASIC20.17■□□□□ 0.82
OPN1SWP03999 MIR6724-4-201ENST00000617390 92 ntBASIC20.17■□□□□ 0.82
OPN1SWP03999 MIR6724-3-201ENST00000622482 92 ntBASIC20.17■□□□□ 0.82
OPN1SWP03999 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
OPN1SWP03999 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
OPN1SWP03999 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
OPN1SWP03999 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.17■□□□□ 0.82
OPN1SWP03999 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
OPN1SWP03999 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
OPN1SWP03999 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
OPN1SWP03999 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
OPN1SWP03999 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
OPN1SWP03999 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.16■□□□□ 0.82
OPN1SWP03999 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
OPN1SWP03999 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
OPN1SWP03999 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms