Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL1A1P02452 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.35■■□□□ 1.81
COL1A1P02452 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL1A1P02452 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.35■■□□□ 1.81
COL1A1P02452 AC104771.1-201ENST00000603335 964 ntBASIC26.35■■□□□ 1.81
COL1A1P02452 BID-214ENST00000617586 542 ntTSL 5 BASIC26.35■■□□□ 1.81
COL1A1P02452 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.35■■□□□ 1.81
COL1A1P02452 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL1A1P02452 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.34■■□□□ 1.81
COL1A1P02452 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.34■■□□□ 1.81
COL1A1P02452 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL1A1P02452 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL1A1P02452 AC005224.4-201ENST00000583262 1652 ntBASIC26.34■■□□□ 1.81
COL1A1P02452 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL1A1P02452 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.34■■□□□ 1.81
COL1A1P02452 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.34■■□□□ 1.81
COL1A1P02452 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.34■■□□□ 1.81
COL1A1P02452 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.34■■□□□ 1.81
COL1A1P02452 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.34■■□□□ 1.81
COL1A1P02452 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL1A1P02452 DUSP8P5-201ENST00000422884 1815 ntBASIC26.34■■□□□ 1.81
COL1A1P02452 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL1A1P02452 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A1P02452 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A1P02452 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A1P02452 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
COL1A1P02452 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A1P02452 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A1P02452 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A1P02452 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A1P02452 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL1A1P02452 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL1A1P02452 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL1A1P02452 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.32■■□□□ 1.8
COL1A1P02452 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
COL1A1P02452 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.32■■□□□ 1.8
COL1A1P02452 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL1A1P02452 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.32■■□□□ 1.8
COL1A1P02452 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.32■■□□□ 1.8
COL1A1P02452 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL1A1P02452 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
COL1A1P02452 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.31■■□□□ 1.8
COL1A1P02452 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL1A1P02452 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.3■■□□□ 1.8
COL1A1P02452 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.3■■□□□ 1.8
COL1A1P02452 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.3■■□□□ 1.8
COL1A1P02452 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A1P02452 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.3■■□□□ 1.8
COL1A1P02452 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A1P02452 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A1P02452 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A1P02452 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A1P02452 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A1P02452 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A1P02452 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL1A1P02452 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A1P02452 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL1A1P02452 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL1A1P02452 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.29■■□□□ 1.8
COL1A1P02452 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
COL1A1P02452 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL1A1P02452 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL1A1P02452 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.29■■□□□ 1.8
COL1A1P02452 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL1A1P02452 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.28■■□□□ 1.8
COL1A1P02452 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL1A1P02452 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL1A1P02452 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL1A1P02452 KRT19P1-201ENST00000405746 1186 ntBASIC26.28■■□□□ 1.8
COL1A1P02452 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.28■■□□□ 1.8
COL1A1P02452 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL1A1P02452 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL1A1P02452 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL1A1P02452 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL1A1P02452 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL1A1P02452 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL1A1P02452 AC006970.2-201ENST00000450065 779 ntBASIC26.27■■□□□ 1.8
COL1A1P02452 AC079140.4-201ENST00000507448 529 ntBASIC26.27■■□□□ 1.8
COL1A1P02452 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.27■■□□□ 1.8
COL1A1P02452 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL1A1P02452 AC087742.1-201ENST00000575880 1738 ntBASIC26.27■■□□□ 1.8
COL1A1P02452 LINC00526-201ENST00000581067 1875 ntBASIC26.26■■□□□ 1.79
COL1A1P02452 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL1A1P02452 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COL1A1P02452 ABHD17AP1-201ENST00000358206 933 ntBASIC26.26■■□□□ 1.79
COL1A1P02452 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.26■■□□□ 1.79
COL1A1P02452 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
COL1A1P02452 AC079089.2-201ENST00000531211 1277 ntBASIC26.26■■□□□ 1.79
COL1A1P02452 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.26■■□□□ 1.79
COL1A1P02452 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL1A1P02452 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL1A1P02452 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
COL1A1P02452 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL1A1P02452 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
COL1A1P02452 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL1A1P02452 CROCCP5-201ENST00000436658 830 ntBASIC26.25■■□□□ 1.79
COL1A1P02452 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
COL1A1P02452 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL1A1P02452 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL1A1P02452 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms