Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRBC1P01850 AC080038.3-201ENST00000623346 1952 ntBASIC21.76■■□□□ 1.07
TRBC1P01850 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TRBC1P01850 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRBC1P01850 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.75■■□□□ 1.07
TRBC1P01850 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRBC1P01850 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRBC1P01850 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.75■■□□□ 1.07
TRBC1P01850 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.75■■□□□ 1.07
TRBC1P01850 AC012414.1-201ENST00000556676 535 ntBASIC21.75■■□□□ 1.07
TRBC1P01850 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.75■■□□□ 1.07
TRBC1P01850 AL358852.1-201ENST00000623174 1268 ntBASIC21.75■■□□□ 1.07
TRBC1P01850 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TRBC1P01850 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRBC1P01850 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBC1P01850 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBC1P01850 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.74■■□□□ 1.07
TRBC1P01850 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBC1P01850 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.74■■□□□ 1.07
TRBC1P01850 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.74■■□□□ 1.07
TRBC1P01850 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRBC1P01850 AL354811.1-201ENST00000610286 706 ntBASIC21.74■■□□□ 1.07
TRBC1P01850 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBC1P01850 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.74■■□□□ 1.07
TRBC1P01850 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRBC1P01850 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.73■■□□□ 1.07
TRBC1P01850 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.73■■□□□ 1.07
TRBC1P01850 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.73■■□□□ 1.07
TRBC1P01850 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.73■■□□□ 1.07
TRBC1P01850 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBC1P01850 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 OR7E47P-201ENST00000546390 1422 ntBASIC21.72■■□□□ 1.07
TRBC1P01850 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRBC1P01850 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.72■■□□□ 1.07
TRBC1P01850 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRBC1P01850 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.72■■□□□ 1.07
TRBC1P01850 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.72■■□□□ 1.07
TRBC1P01850 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.72■■□□□ 1.07
TRBC1P01850 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.72■■□□□ 1.07
TRBC1P01850 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.72■■□□□ 1.07
TRBC1P01850 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRBC1P01850 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRBC1P01850 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBC1P01850 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.71■■□□□ 1.07
TRBC1P01850 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBC1P01850 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.71■■□□□ 1.07
TRBC1P01850 GUSBP5-202ENST00000510805 1989 ntBASIC21.71■■□□□ 1.07
TRBC1P01850 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBC1P01850 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TRBC1P01850 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TRBC1P01850 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TRBC1P01850 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.71■■□□□ 1.07
TRBC1P01850 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBC1P01850 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.71■■□□□ 1.07
TRBC1P01850 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.71■■□□□ 1.07
TRBC1P01850 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRBC1P01850 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBC1P01850 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBC1P01850 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TRBC1P01850 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.7■■□□□ 1.06
TRBC1P01850 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.7■■□□□ 1.06
TRBC1P01850 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRBC1P01850 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
TRBC1P01850 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.7■■□□□ 1.06
TRBC1P01850 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.7■■□□□ 1.06
TRBC1P01850 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBC1P01850 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
TRBC1P01850 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBC1P01850 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRBC1P01850 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBC1P01850 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.69■■□□□ 1.06
TRBC1P01850 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.69■■□□□ 1.06
TRBC1P01850 MIR6084-201ENST00000622012 110 ntBASIC21.69■■□□□ 1.06
TRBC1P01850 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms