Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCA1O95477 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ABCA1O95477 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCA1O95477 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
ABCA1O95477 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCA1O95477 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCA1O95477 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.13■□□□□ 0.49
ABCA1O95477 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCA1O95477 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCA1O95477 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCA1O95477 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCA1O95477 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCA1O95477 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCA1O95477 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ABCA1O95477 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCA1O95477 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ABCA1O95477 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCA1O95477 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.12■□□□□ 0.49
ABCA1O95477 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ABCA1O95477 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ABCA1O95477 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCA1O95477 AC087239.1-201ENST00000622671 572 ntBASIC18.12■□□□□ 0.49
ABCA1O95477 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCA1O95477 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.12■□□□□ 0.49
ABCA1O95477 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ABCA1O95477 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.11■□□□□ 0.49
ABCA1O95477 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.11■□□□□ 0.49
ABCA1O95477 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.11■□□□□ 0.49
ABCA1O95477 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.11■□□□□ 0.49
ABCA1O95477 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.11■□□□□ 0.49
ABCA1O95477 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.11■□□□□ 0.49
ABCA1O95477 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ABCA1O95477 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ABCA1O95477 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.11■□□□□ 0.49
ABCA1O95477 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ABCA1O95477 AC093827.2-201ENST00000512654 315 ntBASIC18.11■□□□□ 0.49
ABCA1O95477 DUX4L16-201ENST00000555130 1264 ntBASIC18.11■□□□□ 0.49
ABCA1O95477 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.11■□□□□ 0.49
ABCA1O95477 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA1O95477 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.1■□□□□ 0.49
ABCA1O95477 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 AL050303.2-201ENST00000619798 666 ntBASIC18.1■□□□□ 0.49
ABCA1O95477 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.1■□□□□ 0.49
ABCA1O95477 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA1O95477 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ABCA1O95477 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.09■□□□□ 0.49
ABCA1O95477 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCA1O95477 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ABCA1O95477 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ABCA1O95477 MIR4651-201ENST00000582622 73 ntBASIC18.09■□□□□ 0.49
ABCA1O95477 AC011767.1-201ENST00000617410 1153 ntBASIC18.09■□□□□ 0.49
ABCA1O95477 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.09■□□□□ 0.49
ABCA1O95477 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ABCA1O95477 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCA1O95477 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ABCA1O95477 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCA1O95477 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCA1O95477 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ABCA1O95477 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
ABCA1O95477 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.09■□□□□ 0.49
ABCA1O95477 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ABCA1O95477 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ABCA1O95477 AC004687.1-201ENST00000579003 1625 ntBASIC18.08■□□□□ 0.49
ABCA1O95477 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ABCA1O95477 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ABCA1O95477 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ABCA1O95477 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCA1O95477 AF201337.1-201ENST00000520239 748 ntBASIC18.08■□□□□ 0.48
ABCA1O95477 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.08■□□□□ 0.48
ABCA1O95477 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ABCA1O95477 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
ABCA1O95477 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ABCA1O95477 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCA1O95477 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.08■□□□□ 0.48
ABCA1O95477 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ABCA1O95477 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ABCA1O95477 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ABCA1O95477 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ABCA1O95477 AC073210.2-201ENST00000430369 194 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms