Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC092118.2-201ENST00000613495 667 ntBASIC33.07■■■□□ 2.88
RAPGEF3O95398 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
RAPGEF3O95398 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RAPGEF3O95398 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
RAPGEF3O95398 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
RAPGEF3O95398 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
RAPGEF3O95398 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC33.06■■■□□ 2.88
RAPGEF3O95398 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
RAPGEF3O95398 AC142381.4-202ENST00000563973 229 ntBASIC33.06■■■□□ 2.88
RAPGEF3O95398 MFF-207ENST00000409565 1548 ntTSL 2 BASIC33.06■■■□□ 2.88
RAPGEF3O95398 USP45-205ENST00000472914 1617 ntTSL 5 BASIC33.06■■■□□ 2.88
RAPGEF3O95398 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
RAPGEF3O95398 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
RAPGEF3O95398 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC33.05■■■□□ 2.88
RAPGEF3O95398 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
RAPGEF3O95398 AC093787.1-201ENST00000450396 207 ntBASIC33.05■■■□□ 2.88
RAPGEF3O95398 IRX5-204ENST00000560154 879 ntTSL 5 BASIC33.05■■■□□ 2.88
RAPGEF3O95398 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
RAPGEF3O95398 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
RAPGEF3O95398 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
RAPGEF3O95398 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC33.04■■■□□ 2.88
RAPGEF3O95398 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
RAPGEF3O95398 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC33.04■■■□□ 2.88
RAPGEF3O95398 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC33.04■■■□□ 2.88
RAPGEF3O95398 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC33.04■■■□□ 2.88
RAPGEF3O95398 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC33.03■■■□□ 2.88
RAPGEF3O95398 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC33.03■■■□□ 2.88
RAPGEF3O95398 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
RAPGEF3O95398 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC33.03■■■□□ 2.88
RAPGEF3O95398 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC33.03■■■□□ 2.88
RAPGEF3O95398 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC33.03■■■□□ 2.88
RAPGEF3O95398 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
RAPGEF3O95398 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC33.03■■■□□ 2.88
RAPGEF3O95398 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
RAPGEF3O95398 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
RAPGEF3O95398 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
RAPGEF3O95398 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
RAPGEF3O95398 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
RAPGEF3O95398 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC33.02■■■□□ 2.88
RAPGEF3O95398 BAALC-201ENST00000297574 801 ntTSL 3 BASIC33.02■■■□□ 2.88
RAPGEF3O95398 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC33.02■■■□□ 2.88
RAPGEF3O95398 AC128676.1-201ENST00000454392 318 ntBASIC33.02■■■□□ 2.88
RAPGEF3O95398 AC006058.3-201ENST00000606217 1069 ntBASIC33.02■■■□□ 2.88
RAPGEF3O95398 MYC-209ENST00000641252 345 ntBASIC33.02■■■□□ 2.88
RAPGEF3O95398 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
RAPGEF3O95398 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC33.01■■■□□ 2.87
RAPGEF3O95398 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
RAPGEF3O95398 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC33.01■■■□□ 2.87
RAPGEF3O95398 AC013268.1-206ENST00000638368 961 ntBASIC33.01■■■□□ 2.87
RAPGEF3O95398 AC112229.1-201ENST00000639295 961 ntBASIC33.01■■■□□ 2.87
RAPGEF3O95398 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
RAPGEF3O95398 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
RAPGEF3O95398 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC33■■■□□ 2.87
RAPGEF3O95398 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC33■■■□□ 2.87
RAPGEF3O95398 AC010141.2-201ENST00000452426 721 ntBASIC33■■■□□ 2.87
RAPGEF3O95398 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC33■■■□□ 2.87
RAPGEF3O95398 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
RAPGEF3O95398 BMP1-204ENST00000397814 836 ntTSL 4 BASIC32.99■■■□□ 2.87
RAPGEF3O95398 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC32.99■■■□□ 2.87
RAPGEF3O95398 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC32.99■■■□□ 2.87
RAPGEF3O95398 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC32.99■■■□□ 2.87
RAPGEF3O95398 AC145676.1-201ENST00000514988 2004 ntBASIC32.99■■■□□ 2.87
RAPGEF3O95398 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RAPGEF3O95398 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
RAPGEF3O95398 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RAPGEF3O95398 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RAPGEF3O95398 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC32.98■■■□□ 2.87
RAPGEF3O95398 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC32.98■■■□□ 2.87
RAPGEF3O95398 MMAB-206ENST00000540016 945 ntTSL 3 BASIC32.98■■■□□ 2.87
RAPGEF3O95398 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC32.98■■■□□ 2.87
RAPGEF3O95398 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
RAPGEF3O95398 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RAPGEF3O95398 AC079630.1-202ENST00000618127 1840 ntBASIC32.98■■■□□ 2.87
RAPGEF3O95398 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
RAPGEF3O95398 TERF1P5-201ENST00000477545 1207 ntBASIC32.97■■■□□ 2.87
RAPGEF3O95398 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC32.97■■■□□ 2.87
RAPGEF3O95398 PLLP-204ENST00000569059 665 ntTSL 3 BASIC32.97■■■□□ 2.87
RAPGEF3O95398 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC32.97■■■□□ 2.87
RAPGEF3O95398 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC32.97■■■□□ 2.87
RAPGEF3O95398 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC32.97■■■□□ 2.87
RAPGEF3O95398 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
RAPGEF3O95398 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RAPGEF3O95398 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC32.96■■■□□ 2.87
RAPGEF3O95398 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
RAPGEF3O95398 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC32.96■■■□□ 2.87
RAPGEF3O95398 KRT18P20-201ENST00000548986 1279 ntBASIC32.96■■■□□ 2.87
RAPGEF3O95398 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC32.96■■■□□ 2.87
RAPGEF3O95398 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC32.96■■■□□ 2.87
RAPGEF3O95398 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RAPGEF3O95398 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RAPGEF3O95398 AC055733.4-201ENST00000638462 1354 ntBASIC32.96■■■□□ 2.87
RAPGEF3O95398 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
RAPGEF3O95398 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC32.95■■■□□ 2.87
RAPGEF3O95398 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC32.95■■■□□ 2.87
RAPGEF3O95398 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC32.95■■■□□ 2.87
RAPGEF3O95398 AC016405.3-201ENST00000607710 860 ntBASIC32.95■■■□□ 2.87
RAPGEF3O95398 MMD2-204ENST00000612910 778 ntTSL 5 BASIC32.95■■■□□ 2.87
RAPGEF3O95398 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
RAPGEF3O95398 GAS7-202ENST00000396115 929 ntTSL 5 BASIC32.94■■■□□ 2.86
RAPGEF3O95398 UNC93B4-201ENST00000505679 747 ntBASIC32.94■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms