Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDRT1O95170 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.27■□□□□ 0.68
CDRT1O95170 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.27■□□□□ 0.68
CDRT1O95170 ATP5G2P3-201ENST00000429083 425 ntBASIC19.27■□□□□ 0.68
CDRT1O95170 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDRT1O95170 PVT1_1.1-201ENST00000615125 194 ntBASIC19.27■□□□□ 0.68
CDRT1O95170 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDRT1O95170 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDRT1O95170 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDRT1O95170 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDRT1O95170 AF106564.1-201ENST00000607058 2553 ntBASIC19.27■□□□□ 0.67
CDRT1O95170 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDRT1O95170 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDRT1O95170 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDRT1O95170 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDRT1O95170 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDRT1O95170 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDRT1O95170 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.26■□□□□ 0.67
CDRT1O95170 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDRT1O95170 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.26■□□□□ 0.67
CDRT1O95170 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDRT1O95170 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT1O95170 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.25■□□□□ 0.67
CDRT1O95170 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.25■□□□□ 0.67
CDRT1O95170 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDRT1O95170 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT1O95170 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT1O95170 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT1O95170 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.25■□□□□ 0.67
CDRT1O95170 MIR4281-201ENST00000580852 62 ntBASIC19.25■□□□□ 0.67
CDRT1O95170 THA1P-201ENST00000590384 1145 ntBASIC19.25■□□□□ 0.67
CDRT1O95170 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDRT1O95170 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT1O95170 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDRT1O95170 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CDRT1O95170 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.25■□□□□ 0.67
CDRT1O95170 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.24■□□□□ 0.67
CDRT1O95170 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT1O95170 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT1O95170 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT1O95170 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT1O95170 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.24■□□□□ 0.67
CDRT1O95170 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT1O95170 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT1O95170 KRT18P24-201ENST00000344739 1156 ntBASIC19.24■□□□□ 0.67
CDRT1O95170 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.24■□□□□ 0.67
CDRT1O95170 AC010980.1-201ENST00000587192 1142 ntBASIC19.24■□□□□ 0.67
CDRT1O95170 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT1O95170 Z98882.1-201ENST00000622160 2253 ntBASIC19.24■□□□□ 0.67
CDRT1O95170 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.24■□□□□ 0.67
CDRT1O95170 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDRT1O95170 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.24■□□□□ 0.67
CDRT1O95170 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.24■□□□□ 0.67
CDRT1O95170 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.24■□□□□ 0.67
CDRT1O95170 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDRT1O95170 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDRT1O95170 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
CDRT1O95170 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.23■□□□□ 0.67
CDRT1O95170 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.23■□□□□ 0.67
CDRT1O95170 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDRT1O95170 AC144652.1-201ENST00000609974 1624 ntBASIC19.23■□□□□ 0.67
CDRT1O95170 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.23■□□□□ 0.67
CDRT1O95170 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.23■□□□□ 0.67
CDRT1O95170 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.23■□□□□ 0.67
CDRT1O95170 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CDRT1O95170 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.23■□□□□ 0.67
CDRT1O95170 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.23■□□□□ 0.67
CDRT1O95170 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDRT1O95170 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDRT1O95170 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDRT1O95170 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT1O95170 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CDRT1O95170 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT1O95170 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.22■□□□□ 0.67
CDRT1O95170 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT1O95170 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.22■□□□□ 0.67
CDRT1O95170 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDRT1O95170 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT1O95170 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT1O95170 FEM1AP4-201ENST00000443167 1987 ntBASIC19.22■□□□□ 0.67
CDRT1O95170 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT1O95170 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CDRT1O95170 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT1O95170 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.22■□□□□ 0.67
CDRT1O95170 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT1O95170 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT1O95170 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDRT1O95170 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms