Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NKX2-2O95096 OR7E47P-201ENST00000546390 1422 ntBASIC20.08■□□□□ 0.8
NKX2-2O95096 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
NKX2-2O95096 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NKX2-2O95096 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NKX2-2O95096 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NKX2-2O95096 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
NKX2-2O95096 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-2O95096 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.07■□□□□ 0.8
NKX2-2O95096 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-2O95096 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-2O95096 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-2O95096 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-2O95096 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-2O95096 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
NKX2-2O95096 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-2O95096 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.07■□□□□ 0.8
NKX2-2O95096 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.07■□□□□ 0.8
NKX2-2O95096 AC133561.4-201ENST00000566112 224 ntBASIC20.07■□□□□ 0.8
NKX2-2O95096 AL139246.5-201ENST00000606645 996 ntBASIC20.07■□□□□ 0.8
NKX2-2O95096 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NKX2-2O95096 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NKX2-2O95096 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-2O95096 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NKX2-2O95096 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-2O95096 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NKX2-2O95096 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-2O95096 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-2O95096 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-2O95096 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-2O95096 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.06■□□□□ 0.8
NKX2-2O95096 AP001330.3-201ENST00000520123 633 ntBASIC20.06■□□□□ 0.8
NKX2-2O95096 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.06■□□□□ 0.8
NKX2-2O95096 AC027682.1-201ENST00000562846 899 ntBASIC20.06■□□□□ 0.8
NKX2-2O95096 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.06■□□□□ 0.8
NKX2-2O95096 AC008764.7-201ENST00000593779 1081 ntBASIC20.06■□□□□ 0.8
NKX2-2O95096 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-2O95096 AL031432.3-201ENST00000607698 485 ntBASIC20.06■□□□□ 0.8
NKX2-2O95096 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.06■□□□□ 0.8
NKX2-2O95096 AL355001.2-201ENST00000620617 1191 ntBASIC20.06■□□□□ 0.8
NKX2-2O95096 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.06■□□□□ 0.8
NKX2-2O95096 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-2O95096 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.06■□□□□ 0.8
NKX2-2O95096 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NKX2-2O95096 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
NKX2-2O95096 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.05■□□□□ 0.8
NKX2-2O95096 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 AC126544.1-201ENST00000580842 1059 ntBASIC20.05■□□□□ 0.8
NKX2-2O95096 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.05■□□□□ 0.8
NKX2-2O95096 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.05■□□□□ 0.8
NKX2-2O95096 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NKX2-2O95096 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.05■□□□□ 0.8
NKX2-2O95096 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-2O95096 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-2O95096 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-2O95096 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-2O95096 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NKX2-2O95096 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-2O95096 AC099791.1-201ENST00000416440 715 ntBASIC20.04■□□□□ 0.8
NKX2-2O95096 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-2O95096 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-2O95096 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-2O95096 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-2O95096 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-2O95096 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-2O95096 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-2O95096 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
NKX2-2O95096 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-2O95096 MIR939-201ENST00000401314 82 ntBASIC20.03■□□□□ 0.8
NKX2-2O95096 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.03■□□□□ 0.8
NKX2-2O95096 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.03■□□□□ 0.8
NKX2-2O95096 IGHV3-19-201ENST00000521488 291 ntBASIC20.03■□□□□ 0.8
NKX2-2O95096 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-2O95096 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
NKX2-2O95096 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-2O95096 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-2O95096 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.03■□□□□ 0.8
NKX2-2O95096 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.03■□□□□ 0.8
NKX2-2O95096 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-2O95096 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NKX2-2O95096 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.02■□□□□ 0.8
NKX2-2O95096 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NKX2-2O95096 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.02■□□□□ 0.8
NKX2-2O95096 LINC00565-201ENST00000562710 2331 ntBASIC20.02■□□□□ 0.8
NKX2-2O95096 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms