Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC29.14■■■□□ 2.26
LTN1O94822 APTR-205ENST00000447009 902 ntTSL 2 BASIC29.14■■■□□ 2.26
LTN1O94822 AC098934.4-201ENST00000564127 592 ntBASIC29.14■■■□□ 2.26
LTN1O94822 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC29.14■■■□□ 2.26
LTN1O94822 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC29.14■■■□□ 2.26
LTN1O94822 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC29.14■■■□□ 2.26
LTN1O94822 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
LTN1O94822 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
LTN1O94822 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.14■■■□□ 2.25
LTN1O94822 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC29.13■■■□□ 2.25
LTN1O94822 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC29.13■■■□□ 2.25
LTN1O94822 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC29.13■■■□□ 2.25
LTN1O94822 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
LTN1O94822 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC29.13■■■□□ 2.25
LTN1O94822 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC29.13■■■□□ 2.25
LTN1O94822 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC29.13■■■□□ 2.25
LTN1O94822 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
LTN1O94822 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
LTN1O94822 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC29.13■■■□□ 2.25
LTN1O94822 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC29.13■■■□□ 2.25
LTN1O94822 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC29.13■■■□□ 2.25
LTN1O94822 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC29.13■■■□□ 2.25
LTN1O94822 AC231657.2-201ENST00000624556 255 ntBASIC29.13■■■□□ 2.25
LTN1O94822 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
LTN1O94822 ANOS2P-203ENST00000472227 1816 ntBASIC29.12■■■□□ 2.25
LTN1O94822 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC29.12■■■□□ 2.25
LTN1O94822 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
LTN1O94822 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
LTN1O94822 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
LTN1O94822 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC29.12■■■□□ 2.25
LTN1O94822 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
LTN1O94822 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
LTN1O94822 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC29.11■■■□□ 2.25
LTN1O94822 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC29.11■■■□□ 2.25
LTN1O94822 AC142086.2-201ENST00000569753 217 ntBASIC29.11■■■□□ 2.25
LTN1O94822 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
LTN1O94822 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC29.11■■■□□ 2.25
LTN1O94822 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC29.11■■■□□ 2.25
LTN1O94822 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC29.11■■■□□ 2.25
LTN1O94822 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC29.11■■■□□ 2.25
LTN1O94822 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
LTN1O94822 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC29.1■■■□□ 2.25
LTN1O94822 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC29.1■■■□□ 2.25
LTN1O94822 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
LTN1O94822 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC29.1■■■□□ 2.25
LTN1O94822 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
LTN1O94822 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
LTN1O94822 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
LTN1O94822 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC29.09■■■□□ 2.25
LTN1O94822 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
LTN1O94822 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC29.09■■■□□ 2.25
LTN1O94822 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC29.09■■■□□ 2.25
LTN1O94822 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.25
LTN1O94822 GPX1P1-201ENST00000388829 606 ntBASIC29.08■■■□□ 2.25
LTN1O94822 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC29.08■■■□□ 2.25
LTN1O94822 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC29.08■■■□□ 2.25
LTN1O94822 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC29.08■■■□□ 2.25
LTN1O94822 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
LTN1O94822 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
LTN1O94822 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
LTN1O94822 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
LTN1O94822 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC29.08■■■□□ 2.25
LTN1O94822 AC055733.4-201ENST00000638462 1354 ntBASIC29.08■■■□□ 2.25
LTN1O94822 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
LTN1O94822 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC29.08■■■□□ 2.25
LTN1O94822 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
LTN1O94822 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
LTN1O94822 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC29.08■■■□□ 2.25
LTN1O94822 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC29.08■■■□□ 2.25
LTN1O94822 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
LTN1O94822 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
LTN1O94822 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC29.07■■■□□ 2.24
LTN1O94822 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
LTN1O94822 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
LTN1O94822 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC29.07■■■□□ 2.24
LTN1O94822 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC29.06■■■□□ 2.24
LTN1O94822 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
LTN1O94822 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
LTN1O94822 AC010141.2-201ENST00000452426 721 ntBASIC29.06■■■□□ 2.24
LTN1O94822 OAS3-207ENST00000551007 998 ntTSL 2 BASIC29.06■■■□□ 2.24
LTN1O94822 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
LTN1O94822 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
LTN1O94822 SERP1-208ENST00000491660 830 ntTSL 2 BASIC29.06■■■□□ 2.24
LTN1O94822 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
LTN1O94822 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
LTN1O94822 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
LTN1O94822 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC29.05■■■□□ 2.24
LTN1O94822 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC29.05■■■□□ 2.24
LTN1O94822 TFG-210ENST00000620299 1289 ntTSL 5 BASIC29.05■■■□□ 2.24
LTN1O94822 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
LTN1O94822 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
LTN1O94822 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
LTN1O94822 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC29.04■■■□□ 2.24
LTN1O94822 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
LTN1O94822 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC29.04■■■□□ 2.24
LTN1O94822 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
LTN1O94822 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
LTN1O94822 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
LTN1O94822 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
LTN1O94822 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms