Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
BEST1O76090 AC080038.3-201ENST00000623346 1952 ntBASIC22.86■■□□□ 1.25
BEST1O76090 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.86■■□□□ 1.25
BEST1O76090 BX005040.4-201ENST00000637145 1518 ntBASIC22.86■■□□□ 1.25
BEST1O76090 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.86■■□□□ 1.25
BEST1O76090 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 AC139530.1-201ENST00000575312 1977 ntBASIC22.85■■□□□ 1.25
BEST1O76090 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
BEST1O76090 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 AC123595.1-201ENST00000440769 1046 ntBASIC22.85■■□□□ 1.25
BEST1O76090 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.85■■□□□ 1.25
BEST1O76090 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.85■■□□□ 1.25
BEST1O76090 TPRG1LP1-201ENST00000598702 760 ntBASIC22.85■■□□□ 1.25
BEST1O76090 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BEST1O76090 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.84■■□□□ 1.25
BEST1O76090 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
BEST1O76090 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
BEST1O76090 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
BEST1O76090 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.84■■□□□ 1.25
BEST1O76090 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.84■■□□□ 1.25
BEST1O76090 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
BEST1O76090 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
BEST1O76090 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
BEST1O76090 ESRRAP2-201ENST00000418437 1549 ntBASIC22.83■■□□□ 1.25
BEST1O76090 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
BEST1O76090 DUX4L2-201ENST00000561772 1275 ntBASIC22.83■■□□□ 1.25
BEST1O76090 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.83■■□□□ 1.25
BEST1O76090 CCDC92B-201ENST00000575506 885 ntBASIC22.83■■□□□ 1.25
BEST1O76090 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.83■■□□□ 1.25
BEST1O76090 DUX4L6-201ENST00000626483 1275 ntBASIC22.83■■□□□ 1.25
BEST1O76090 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
BEST1O76090 DUX4L1-201ENST00000627662 1275 ntBASIC22.83■■□□□ 1.25
BEST1O76090 DUX4L8-201ENST00000629013 1275 ntBASIC22.83■■□□□ 1.25
BEST1O76090 DUX4L3-201ENST00000630187 1275 ntBASIC22.83■■□□□ 1.25
BEST1O76090 DUX4L7-201ENST00000630678 1275 ntBASIC22.83■■□□□ 1.25
BEST1O76090 DUX4L5-201ENST00000630834 1275 ntBASIC22.83■■□□□ 1.25
BEST1O76090 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
BEST1O76090 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.83■■□□□ 1.24
BEST1O76090 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
BEST1O76090 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
BEST1O76090 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BEST1O76090 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.82■■□□□ 1.24
BEST1O76090 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.82■■□□□ 1.24
BEST1O76090 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BEST1O76090 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
BEST1O76090 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.82■■□□□ 1.24
BEST1O76090 MIR5787-201ENST00000611784 55 ntBASIC22.82■■□□□ 1.24
BEST1O76090 AC133561.1-201ENST00000568600 2415 ntBASIC22.82■■□□□ 1.24
BEST1O76090 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BEST1O76090 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BEST1O76090 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.82■■□□□ 1.24
BEST1O76090 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BEST1O76090 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.81■■□□□ 1.24
BEST1O76090 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.81■■□□□ 1.24
BEST1O76090 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.81■■□□□ 1.24
BEST1O76090 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.81■■□□□ 1.24
BEST1O76090 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.81■■□□□ 1.24
BEST1O76090 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
BEST1O76090 AC127496.7-201ENST00000625110 1798 ntBASIC22.81■■□□□ 1.24
BEST1O76090 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
BEST1O76090 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.8■■□□□ 1.24
BEST1O76090 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
BEST1O76090 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BEST1O76090 LINC02228-203ENST00000641970 1355 ntBASIC22.8■■□□□ 1.24
BEST1O76090 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.8■■□□□ 1.24
BEST1O76090 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
BEST1O76090 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.8■■□□□ 1.24
BEST1O76090 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BEST1O76090 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
BEST1O76090 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms