Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCN2BO60939 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.56■□□□□ 0.88
SCN2BO60939 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCN2BO60939 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SCN2BO60939 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN2BO60939 AC133637.1-201ENST00000624115 1537 ntBASIC20.55■□□□□ 0.88
SCN2BO60939 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN2BO60939 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN2BO60939 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SCN2BO60939 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.55■□□□□ 0.88
SCN2BO60939 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN2BO60939 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.55■□□□□ 0.88
SCN2BO60939 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN2BO60939 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SCN2BO60939 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.55■□□□□ 0.88
SCN2BO60939 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN2BO60939 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SCN2BO60939 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN2BO60939 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SCN2BO60939 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN2BO60939 GUSBP5-201ENST00000418136 578 ntBASIC20.54■□□□□ 0.88
SCN2BO60939 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN2BO60939 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN2BO60939 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN2BO60939 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SCN2BO60939 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN2BO60939 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN2BO60939 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN2BO60939 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN2BO60939 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN2BO60939 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN2BO60939 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN2BO60939 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN2BO60939 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SCN2BO60939 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.53■□□□□ 0.88
SCN2BO60939 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN2BO60939 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN2BO60939 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN2BO60939 MIR3621-201ENST00000580529 85 ntBASIC20.53■□□□□ 0.88
SCN2BO60939 pRNA.6-201ENST00000610482 90 ntBASIC20.53■□□□□ 0.88
SCN2BO60939 pRNA.5-201ENST00000612139 90 ntBASIC20.53■□□□□ 0.88
SCN2BO60939 pRNA.11-201ENST00000618423 90 ntBASIC20.53■□□□□ 0.88
SCN2BO60939 pRNA.13-201ENST00000619112 90 ntBASIC20.53■□□□□ 0.88
SCN2BO60939 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCN2BO60939 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN2BO60939 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN2BO60939 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN2BO60939 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN2BO60939 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN2BO60939 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN2BO60939 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN2BO60939 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN2BO60939 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN2BO60939 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN2BO60939 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.52■□□□□ 0.88
SCN2BO60939 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN2BO60939 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN2BO60939 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SCN2BO60939 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SCN2BO60939 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN2BO60939 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.52■□□□□ 0.87
SCN2BO60939 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCN2BO60939 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCN2BO60939 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCN2BO60939 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.51■□□□□ 0.87
SCN2BO60939 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.51■□□□□ 0.87
SCN2BO60939 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SCN2BO60939 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN2BO60939 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN2BO60939 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SCN2BO60939 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCN2BO60939 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.51■□□□□ 0.87
SCN2BO60939 AC099791.2-201ENST00000605725 427 ntBASIC20.51■□□□□ 0.87
SCN2BO60939 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SCN2BO60939 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN2BO60939 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.51■□□□□ 0.87
SCN2BO60939 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SCN2BO60939 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN2BO60939 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.51■□□□□ 0.87
SCN2BO60939 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN2BO60939 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN2BO60939 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN2BO60939 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN2BO60939 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN2BO60939 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN2BO60939 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN2BO60939 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SCN2BO60939 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN2BO60939 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN2BO60939 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SCN2BO60939 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN2BO60939 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms