Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
CTNND1O60716 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.49■■□□□ 1.67
CTNND1O60716 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CTNND1O60716 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.49■■□□□ 1.67
CTNND1O60716 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CTNND1O60716 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CTNND1O60716 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CTNND1O60716 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CTNND1O60716 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CTNND1O60716 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.48■■□□□ 1.67
CTNND1O60716 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CTNND1O60716 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CTNND1O60716 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CTNND1O60716 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CTNND1O60716 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CTNND1O60716 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CTNND1O60716 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.47■■□□□ 1.67
CTNND1O60716 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CTNND1O60716 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.47■■□□□ 1.67
CTNND1O60716 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CTNND1O60716 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CTNND1O60716 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CTNND1O60716 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.47■■□□□ 1.67
CTNND1O60716 GPX1P1-201ENST00000388829 606 ntBASIC25.47■■□□□ 1.67
CTNND1O60716 AL355802.2-201ENST00000402069 882 ntBASIC25.47■■□□□ 1.67
CTNND1O60716 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.47■■□□□ 1.67
CTNND1O60716 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.47■■□□□ 1.67
CTNND1O60716 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CTNND1O60716 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CTNND1O60716 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CTNND1O60716 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.47■■□□□ 1.67
CTNND1O60716 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CTNND1O60716 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CTNND1O60716 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CTNND1O60716 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CTNND1O60716 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.46■■□□□ 1.67
CTNND1O60716 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.46■■□□□ 1.67
CTNND1O60716 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.46■■□□□ 1.67
CTNND1O60716 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CTNND1O60716 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CTNND1O60716 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CTNND1O60716 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.46■■□□□ 1.67
CTNND1O60716 ANOS2P-203ENST00000472227 1816 ntBASIC25.46■■□□□ 1.67
CTNND1O60716 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.46■■□□□ 1.67
CTNND1O60716 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.46■■□□□ 1.67
CTNND1O60716 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CTNND1O60716 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.46■■□□□ 1.67
CTNND1O60716 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CTNND1O60716 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
CTNND1O60716 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CTNND1O60716 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.45■■□□□ 1.66
CTNND1O60716 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.45■■□□□ 1.66
CTNND1O60716 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.45■■□□□ 1.66
CTNND1O60716 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.45■■□□□ 1.66
CTNND1O60716 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.45■■□□□ 1.66
CTNND1O60716 AC092068.2-201ENST00000590491 1708 ntBASIC25.45■■□□□ 1.66
CTNND1O60716 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CTNND1O60716 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CTNND1O60716 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CTNND1O60716 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CTNND1O60716 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CTNND1O60716 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CTNND1O60716 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CTNND1O60716 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
CTNND1O60716 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.44■■□□□ 1.66
CTNND1O60716 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CTNND1O60716 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CTNND1O60716 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
CTNND1O60716 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.44■■□□□ 1.66
CTNND1O60716 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.43■■□□□ 1.66
CTNND1O60716 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CTNND1O60716 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
CTNND1O60716 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.43■■□□□ 1.66
CTNND1O60716 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.43■■□□□ 1.66
CTNND1O60716 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.43■■□□□ 1.66
CTNND1O60716 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
CTNND1O60716 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CTNND1O60716 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.43■■□□□ 1.66
CTNND1O60716 AC055733.4-201ENST00000638462 1354 ntBASIC25.43■■□□□ 1.66
CTNND1O60716 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.42■■□□□ 1.66
CTNND1O60716 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CTNND1O60716 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CTNND1O60716 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
CTNND1O60716 DUX4L16-201ENST00000555130 1264 ntBASIC25.42■■□□□ 1.66
CTNND1O60716 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.42■■□□□ 1.66
CTNND1O60716 AC231657.2-201ENST00000624556 255 ntBASIC25.42■■□□□ 1.66
CTNND1O60716 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CTNND1O60716 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CTNND1O60716 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
CTNND1O60716 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
CTNND1O60716 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CTNND1O60716 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.41■■□□□ 1.66
CTNND1O60716 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
CTNND1O60716 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.41■■□□□ 1.66
CTNND1O60716 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CTNND1O60716 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.41■■□□□ 1.66
CTNND1O60716 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CTNND1O60716 AC079089.2-201ENST00000531211 1277 ntBASIC25.41■■□□□ 1.66
CTNND1O60716 AP001160.3-201ENST00000601484 763 ntBASIC25.41■■□□□ 1.66
CTNND1O60716 UBE2DNL-204ENST00000602536 740 ntBASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms