Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC28A2O43868 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC28A2O43868 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC28A2O43868 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC28A2O43868 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC28A2O43868 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC28A2O43868 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
SLC28A2O43868 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC28A2O43868 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC28A2O43868 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SLC28A2O43868 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC28A2O43868 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC28A2O43868 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC28A2O43868 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC28A2O43868 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC28A2O43868 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC28A2O43868 AC241377.3-202ENST00000626088 1088 ntBASIC20.79■□□□□ 0.92
SLC28A2O43868 AC241585.3-202ENST00000628937 1088 ntBASIC20.79■□□□□ 0.92
SLC28A2O43868 PKD1P6-201ENST00000343738 4769 ntBASIC20.79■□□□□ 0.92
SLC28A2O43868 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC28A2O43868 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC28A2O43868 GUSBP5-202ENST00000510805 1989 ntBASIC20.79■□□□□ 0.92
SLC28A2O43868 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC28A2O43868 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC28A2O43868 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC28A2O43868 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC28A2O43868 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC28A2O43868 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SLC28A2O43868 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC28A2O43868 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC28A2O43868 AC144652.1-201ENST00000609974 1624 ntBASIC20.78■□□□□ 0.92
SLC28A2O43868 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC28A2O43868 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC28A2O43868 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC28A2O43868 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SLC28A2O43868 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC28A2O43868 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC28A2O43868 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC28A2O43868 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC28A2O43868 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC28A2O43868 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SLC28A2O43868 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC28A2O43868 AL355802.2-201ENST00000402069 882 ntBASIC20.77■□□□□ 0.92
SLC28A2O43868 KRT18P14-201ENST00000534205 1250 ntBASIC20.77■□□□□ 0.92
SLC28A2O43868 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC28A2O43868 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC28A2O43868 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC28A2O43868 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC28A2O43868 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC28A2O43868 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC28A2O43868 EP400NL-214ENST00000641289 2402 ntBASIC20.76■□□□□ 0.91
SLC28A2O43868 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC28A2O43868 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC28A2O43868 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC28A2O43868 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC28A2O43868 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC28A2O43868 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC28A2O43868 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SLC28A2O43868 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC28A2O43868 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC28A2O43868 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC28A2O43868 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC28A2O43868 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC28A2O43868 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC28A2O43868 AC104771.1-201ENST00000603335 964 ntBASIC20.75■□□□□ 0.91
SLC28A2O43868 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SLC28A2O43868 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC28A2O43868 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC28A2O43868 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC28A2O43868 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC28A2O43868 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC28A2O43868 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC28A2O43868 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SLC28A2O43868 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC28A2O43868 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SLC28A2O43868 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC28A2O43868 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC28A2O43868 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC28A2O43868 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC28A2O43868 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC28A2O43868 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC28A2O43868 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC28A2O43868 AC009102.2-201ENST00000606772 1639 ntBASIC20.74■□□□□ 0.91
SLC28A2O43868 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC28A2O43868 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC28A2O43868 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.73■□□□□ 0.91
SLC28A2O43868 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC28A2O43868 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC28A2O43868 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC28A2O43868 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC28A2O43868 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms