Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IDH3BO43837 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IDH3BO43837 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IDH3BO43837 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
IDH3BO43837 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IDH3BO43837 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
IDH3BO43837 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.78■□□□□ 0.76
IDH3BO43837 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IDH3BO43837 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
IDH3BO43837 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
IDH3BO43837 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
IDH3BO43837 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IDH3BO43837 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
IDH3BO43837 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IDH3BO43837 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IDH3BO43837 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
IDH3BO43837 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IDH3BO43837 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IDH3BO43837 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IDH3BO43837 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
IDH3BO43837 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IDH3BO43837 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IDH3BO43837 C11orf96-202ENST00000528572 1834 ntBASIC19.77■□□□□ 0.76
IDH3BO43837 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IDH3BO43837 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
IDH3BO43837 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IDH3BO43837 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.77■□□□□ 0.76
IDH3BO43837 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.77■□□□□ 0.76
IDH3BO43837 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IDH3BO43837 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
IDH3BO43837 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IDH3BO43837 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
IDH3BO43837 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
IDH3BO43837 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
IDH3BO43837 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
IDH3BO43837 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
IDH3BO43837 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.76■□□□□ 0.75
IDH3BO43837 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
IDH3BO43837 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 AC080038.3-201ENST00000623346 1952 ntBASIC19.76■□□□□ 0.75
IDH3BO43837 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.76■□□□□ 0.75
IDH3BO43837 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 MTDHP2-201ENST00000601468 714 ntBASIC19.76■□□□□ 0.75
IDH3BO43837 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
IDH3BO43837 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IDH3BO43837 AC009102.2-201ENST00000606772 1639 ntBASIC19.76■□□□□ 0.75
IDH3BO43837 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IDH3BO43837 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IDH3BO43837 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IDH3BO43837 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.75■□□□□ 0.75
IDH3BO43837 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IDH3BO43837 MIR4787-201ENST00000607364 84 ntBASIC19.75■□□□□ 0.75
IDH3BO43837 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.75■□□□□ 0.75
IDH3BO43837 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IDH3BO43837 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
IDH3BO43837 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.75■□□□□ 0.75
IDH3BO43837 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.75■□□□□ 0.75
IDH3BO43837 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IDH3BO43837 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
IDH3BO43837 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IDH3BO43837 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IDH3BO43837 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IDH3BO43837 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.74■□□□□ 0.75
IDH3BO43837 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.74■□□□□ 0.75
IDH3BO43837 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IDH3BO43837 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IDH3BO43837 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
IDH3BO43837 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
IDH3BO43837 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IDH3BO43837 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
IDH3BO43837 LINC01960-201ENST00000563759 1884 ntBASIC19.73■□□□□ 0.75
IDH3BO43837 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IDH3BO43837 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.73■□□□□ 0.75
IDH3BO43837 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.73■□□□□ 0.75
IDH3BO43837 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.73■□□□□ 0.75
IDH3BO43837 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IDH3BO43837 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
IDH3BO43837 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.73■□□□□ 0.75
IDH3BO43837 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IDH3BO43837 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.73■□□□□ 0.75
IDH3BO43837 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
IDH3BO43837 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.73■□□□□ 0.75
IDH3BO43837 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IDH3BO43837 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IDH3BO43837 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IDH3BO43837 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.73■□□□□ 0.75
IDH3BO43837 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms