Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
TSPAN6O43657 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TSPAN6O43657 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.69■■□□□ 1.06
TSPAN6O43657 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN6O43657 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN6O43657 AC079089.2-201ENST00000531211 1277 ntBASIC21.69■■□□□ 1.06
TSPAN6O43657 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.69■■□□□ 1.06
TSPAN6O43657 AC022517.1-201ENST00000592429 346 ntBASIC21.69■■□□□ 1.06
TSPAN6O43657 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN6O43657 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.68■■□□□ 1.06
TSPAN6O43657 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TSPAN6O43657 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.68■■□□□ 1.06
TSPAN6O43657 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TSPAN6O43657 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN6O43657 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
TSPAN6O43657 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.68■■□□□ 1.06
TSPAN6O43657 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN6O43657 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN6O43657 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.67■■□□□ 1.06
TSPAN6O43657 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.67■■□□□ 1.06
TSPAN6O43657 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN6O43657 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN6O43657 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN6O43657 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.67■■□□□ 1.06
TSPAN6O43657 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN6O43657 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TSPAN6O43657 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TSPAN6O43657 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN6O43657 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN6O43657 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN6O43657 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.66■■□□□ 1.06
TSPAN6O43657 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TSPAN6O43657 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.66■■□□□ 1.06
TSPAN6O43657 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TSPAN6O43657 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TSPAN6O43657 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN6O43657 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN6O43657 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN6O43657 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.66■■□□□ 1.06
TSPAN6O43657 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.66■■□□□ 1.06
TSPAN6O43657 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN6O43657 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN6O43657 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TSPAN6O43657 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN6O43657 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN6O43657 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.65■■□□□ 1.06
TSPAN6O43657 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TSPAN6O43657 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN6O43657 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TSPAN6O43657 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.65■■□□□ 1.06
TSPAN6O43657 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN6O43657 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.65■■□□□ 1.06
TSPAN6O43657 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN6O43657 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.65■■□□□ 1.06
TSPAN6O43657 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.65■■□□□ 1.06
TSPAN6O43657 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.65■■□□□ 1.06
TSPAN6O43657 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.65■■□□□ 1.06
TSPAN6O43657 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.65■■□□□ 1.06
TSPAN6O43657 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN6O43657 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TSPAN6O43657 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.64■■□□□ 1.06
TSPAN6O43657 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN6O43657 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN6O43657 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TSPAN6O43657 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN6O43657 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TSPAN6O43657 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.64■■□□□ 1.05
TSPAN6O43657 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
TSPAN6O43657 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TSPAN6O43657 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.64■■□□□ 1.05
TSPAN6O43657 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN6O43657 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN6O43657 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN6O43657 AC009237.3-201ENST00000393279 1427 ntBASIC21.63■■□□□ 1.05
TSPAN6O43657 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN6O43657 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN6O43657 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN6O43657 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN6O43657 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
TSPAN6O43657 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.63■■□□□ 1.05
TSPAN6O43657 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.63■■□□□ 1.05
TSPAN6O43657 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.63■■□□□ 1.05
TSPAN6O43657 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN6O43657 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN6O43657 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN6O43657 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN6O43657 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN6O43657 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TSPAN6O43657 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN6O43657 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.62■■□□□ 1.05
TSPAN6O43657 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
TSPAN6O43657 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.62■■□□□ 1.05
TSPAN6O43657 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.62■■□□□ 1.05
TSPAN6O43657 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.62■■□□□ 1.05
TSPAN6O43657 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.62■■□□□ 1.05
TSPAN6O43657 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN6O43657 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TSPAN6O43657 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.62■■□□□ 1.05
TSPAN6O43657 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN6O43657 C1orf229-201ENST00000623686 2258 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms