Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SNAI2O43623 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.12■□□□□ 0.17
SNAI2O43623 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
SNAI2O43623 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.12■□□□□ 0.17
SNAI2O43623 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNAI2O43623 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.12■□□□□ 0.17
SNAI2O43623 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNAI2O43623 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNAI2O43623 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNAI2O43623 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.11■□□□□ 0.17
SNAI2O43623 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNAI2O43623 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.11■□□□□ 0.17
SNAI2O43623 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SNAI2O43623 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.11■□□□□ 0.17
SNAI2O43623 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNAI2O43623 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.11■□□□□ 0.17
SNAI2O43623 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNAI2O43623 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.11■□□□□ 0.17
SNAI2O43623 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNAI2O43623 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNAI2O43623 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNAI2O43623 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNAI2O43623 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.1■□□□□ 0.17
SNAI2O43623 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNAI2O43623 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNAI2O43623 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SNAI2O43623 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SNAI2O43623 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNAI2O43623 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SNAI2O43623 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.1■□□□□ 0.17
SNAI2O43623 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNAI2O43623 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.1■□□□□ 0.17
SNAI2O43623 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNAI2O43623 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNAI2O43623 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNAI2O43623 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SNAI2O43623 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SNAI2O43623 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SNAI2O43623 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SNAI2O43623 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.09■□□□□ 0.17
SNAI2O43623 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.09■□□□□ 0.17
SNAI2O43623 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNAI2O43623 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.09■□□□□ 0.17
SNAI2O43623 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SNAI2O43623 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNAI2O43623 AC026310.3-201ENST00000625186 2373 ntBASIC16.08■□□□□ 0.17
SNAI2O43623 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNAI2O43623 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNAI2O43623 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNAI2O43623 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.08■□□□□ 0.17
SNAI2O43623 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNAI2O43623 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNAI2O43623 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNAI2O43623 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNAI2O43623 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.08■□□□□ 0.16
SNAI2O43623 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.08■□□□□ 0.16
SNAI2O43623 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SNAI2O43623 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.08■□□□□ 0.16
SNAI2O43623 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.08■□□□□ 0.16
SNAI2O43623 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SNAI2O43623 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SNAI2O43623 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SNAI2O43623 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNAI2O43623 AC010542.4-201ENST00000563151 1910 ntBASIC16.07■□□□□ 0.16
SNAI2O43623 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.07■□□□□ 0.16
SNAI2O43623 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNAI2O43623 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNAI2O43623 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.07■□□□□ 0.16
SNAI2O43623 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNAI2O43623 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.07■□□□□ 0.16
SNAI2O43623 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SNAI2O43623 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.07■□□□□ 0.16
SNAI2O43623 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms