Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
NPHP1O15259 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.35■■□□□ 1.97
NPHP1O15259 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.34■■□□□ 1.97
NPHP1O15259 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
NPHP1O15259 AL121832.2-201ENST00000610979 668 ntBASIC27.34■■□□□ 1.97
NPHP1O15259 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.34■■□□□ 1.97
NPHP1O15259 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
NPHP1O15259 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.34■■□□□ 1.97
NPHP1O15259 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
NPHP1O15259 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
NPHP1O15259 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.34■■□□□ 1.97
NPHP1O15259 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
NPHP1O15259 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NPHP1O15259 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NPHP1O15259 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NPHP1O15259 LINC00543-201ENST00000567234 1845 ntBASIC27.33■■□□□ 1.97
NPHP1O15259 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NPHP1O15259 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
NPHP1O15259 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.33■■□□□ 1.97
NPHP1O15259 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.33■■□□□ 1.97
NPHP1O15259 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.33■■□□□ 1.97
NPHP1O15259 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.33■■□□□ 1.97
NPHP1O15259 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.33■■□□□ 1.97
NPHP1O15259 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.33■■□□□ 1.97
NPHP1O15259 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
NPHP1O15259 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
NPHP1O15259 AC004812.2-201ENST00000611079 2094 ntBASIC27.32■■□□□ 1.96
NPHP1O15259 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.32■■□□□ 1.96
NPHP1O15259 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.32■■□□□ 1.96
NPHP1O15259 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
NPHP1O15259 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
NPHP1O15259 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NPHP1O15259 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC27.32■■□□□ 1.96
NPHP1O15259 AC005224.4-201ENST00000583262 1652 ntBASIC27.32■■□□□ 1.96
NPHP1O15259 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
NPHP1O15259 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NPHP1O15259 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.31■■□□□ 1.96
NPHP1O15259 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NPHP1O15259 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NPHP1O15259 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.31■■□□□ 1.96
NPHP1O15259 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NPHP1O15259 AC083906.2-201ENST00000511578 360 ntBASIC27.31■■□□□ 1.96
NPHP1O15259 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.31■■□□□ 1.96
NPHP1O15259 AC231657.2-201ENST00000624556 255 ntBASIC27.31■■□□□ 1.96
NPHP1O15259 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NPHP1O15259 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NPHP1O15259 AC009237.3-201ENST00000393279 1427 ntBASIC27.31■■□□□ 1.96
NPHP1O15259 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NPHP1O15259 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
NPHP1O15259 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
NPHP1O15259 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NPHP1O15259 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.3■■□□□ 1.96
NPHP1O15259 AC020928.2-201ENST00000588717 2197 ntBASIC27.29■■□□□ 1.96
NPHP1O15259 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NPHP1O15259 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NPHP1O15259 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
NPHP1O15259 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NPHP1O15259 AC007322.1-201ENST00000426983 750 ntBASIC27.29■■□□□ 1.96
NPHP1O15259 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NPHP1O15259 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC27.29■■□□□ 1.96
NPHP1O15259 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NPHP1O15259 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NPHP1O15259 ABCB10P4-201ENST00000566803 2184 ntBASIC27.29■■□□□ 1.96
NPHP1O15259 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.28■■□□□ 1.96
NPHP1O15259 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.28■■□□□ 1.96
NPHP1O15259 AC005181.1-201ENST00000604782 1256 ntBASIC27.28■■□□□ 1.96
NPHP1O15259 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NPHP1O15259 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NPHP1O15259 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NPHP1O15259 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NPHP1O15259 SLC29A4P1-201ENST00000398760 971 ntBASIC27.27■■□□□ 1.96
NPHP1O15259 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC27.27■■□□□ 1.96
NPHP1O15259 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.27■■□□□ 1.96
NPHP1O15259 UBE2DNL-204ENST00000602536 740 ntBASIC27.27■■□□□ 1.96
NPHP1O15259 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
NPHP1O15259 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NPHP1O15259 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
NPHP1O15259 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NPHP1O15259 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
NPHP1O15259 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
NPHP1O15259 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.26■■□□□ 1.95
NPHP1O15259 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.26■■□□□ 1.95
NPHP1O15259 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
NPHP1O15259 TSPY20P-201ENST00000450910 630 ntBASIC27.26■■□□□ 1.95
NPHP1O15259 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.26■■□□□ 1.95
NPHP1O15259 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.26■■□□□ 1.95
NPHP1O15259 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
NPHP1O15259 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.26■■□□□ 1.95
NPHP1O15259 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
NPHP1O15259 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
NPHP1O15259 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms