Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC30.68■■■□□ 2.5
CHD2O14647 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC30.68■■■□□ 2.5
CHD2O14647 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHD2O14647 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
CHD2O14647 AC068338.2-201ENST00000563278 1430 ntBASIC30.68■■■□□ 2.5
CHD2O14647 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
CHD2O14647 MKRN4P-201ENST00000444706 1521 ntBASIC30.68■■■□□ 2.5
CHD2O14647 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC30.68■■■□□ 2.5
CHD2O14647 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHD2O14647 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHD2O14647 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHD2O14647 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC30.67■■■□□ 2.5
CHD2O14647 GCSHP5-201ENST00000443090 522 ntBASIC30.66■■■□□ 2.5
CHD2O14647 AC007322.4-201ENST00000509611 723 ntBASIC30.66■■■□□ 2.5
CHD2O14647 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHD2O14647 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
CHD2O14647 MIR4758-201ENST00000577688 71 ntBASIC30.66■■■□□ 2.5
CHD2O14647 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHD2O14647 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC30.65■■■□□ 2.5
CHD2O14647 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHD2O14647 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHD2O14647 AC055733.4-201ENST00000638462 1354 ntBASIC30.65■■■□□ 2.5
CHD2O14647 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHD2O14647 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD2O14647 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
CHD2O14647 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD2O14647 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD2O14647 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD2O14647 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.64■■■□□ 2.5
CHD2O14647 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD2O14647 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD2O14647 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD2O14647 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CHD2O14647 USP45-205ENST00000472914 1617 ntTSL 5 BASIC30.64■■■□□ 2.49
CHD2O14647 ADM-205ENST00000528544 586 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD2O14647 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD2O14647 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
CHD2O14647 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD2O14647 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC30.63■■■□□ 2.49
CHD2O14647 DUSP5P2-201ENST00000426873 1033 ntBASIC30.63■■■□□ 2.49
CHD2O14647 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC30.63■■■□□ 2.49
CHD2O14647 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD2O14647 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD2O14647 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD2O14647 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD2O14647 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
CHD2O14647 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
CHD2O14647 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD2O14647 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC30.62■■■□□ 2.49
CHD2O14647 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CHD2O14647 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CHD2O14647 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC30.62■■■□□ 2.49
CHD2O14647 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CHD2O14647 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC30.61■■■□□ 2.49
CHD2O14647 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.61■■■□□ 2.49
CHD2O14647 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC30.61■■■□□ 2.49
CHD2O14647 MYC-209ENST00000641252 345 ntBASIC30.61■■■□□ 2.49
CHD2O14647 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHD2O14647 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD2O14647 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHD2O14647 MIPEPP3-201ENST00000412105 444 ntBASIC30.61■■■□□ 2.49
CHD2O14647 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHD2O14647 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC30.6■■■□□ 2.49
CHD2O14647 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHD2O14647 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CHD2O14647 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC30.6■■■□□ 2.49
CHD2O14647 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC30.6■■■□□ 2.49
CHD2O14647 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHD2O14647 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CHD2O14647 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CHD2O14647 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CHD2O14647 BET1L-204ENST00000410108 637 ntTSL 3 BASIC30.59■■■□□ 2.49
CHD2O14647 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
CHD2O14647 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
CHD2O14647 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD2O14647 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD2O14647 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD2O14647 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD2O14647 DUSP8P5-201ENST00000422884 1815 ntBASIC30.59■■■□□ 2.49
CHD2O14647 DUSP8P3-201ENST00000399571 1760 ntBASIC30.59■■■□□ 2.49
CHD2O14647 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC30.59■■■□□ 2.49
CHD2O14647 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC30.59■■■□□ 2.49
CHD2O14647 AC092118.2-201ENST00000613495 667 ntBASIC30.59■■■□□ 2.49
CHD2O14647 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CHD2O14647 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHD2O14647 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CHD2O14647 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC30.58■■■□□ 2.49
CHD2O14647 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHD2O14647 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC30.58■■■□□ 2.49
CHD2O14647 LINC00543-201ENST00000567234 1845 ntBASIC30.58■■■□□ 2.49
CHD2O14647 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.58■■■□□ 2.49
CHD2O14647 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD2O14647 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD2O14647 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC30.57■■■□□ 2.48
CHD2O14647 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD2O14647 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
CHD2O14647 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD2O14647 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD2O14647 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.57■■■□□ 2.48
CHD2O14647 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms