Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM38O00635 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM38O00635 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM38O00635 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM38O00635 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM38O00635 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM38O00635 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM38O00635 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRIM38O00635 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM38O00635 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM38O00635 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM38O00635 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
TRIM38O00635 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.76■■□□□ 1.07
TRIM38O00635 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM38O00635 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM38O00635 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRIM38O00635 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIM38O00635 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TRIM38O00635 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM38O00635 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM38O00635 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM38O00635 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM38O00635 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM38O00635 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.75■■□□□ 1.07
TRIM38O00635 CCDC92B-201ENST00000575506 885 ntBASIC21.75■■□□□ 1.07
TRIM38O00635 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM38O00635 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM38O00635 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM38O00635 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM38O00635 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 FP325331.1-202ENST00000623531 1380 ntBASIC21.74■■□□□ 1.07
TRIM38O00635 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIM38O00635 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
TRIM38O00635 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
TRIM38O00635 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TRIM38O00635 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIM38O00635 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIM38O00635 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.74■■□□□ 1.07
TRIM38O00635 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM38O00635 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM38O00635 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM38O00635 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM38O00635 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM38O00635 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM38O00635 OR2I1P-207ENST00000453522 948 ntBASIC21.73■■□□□ 1.07
TRIM38O00635 DUX4L4-201ENST00000566884 1269 ntBASIC21.73■■□□□ 1.07
TRIM38O00635 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM38O00635 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.73■■□□□ 1.07
TRIM38O00635 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM38O00635 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM38O00635 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRIM38O00635 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM38O00635 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM38O00635 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM38O00635 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM38O00635 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM38O00635 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM38O00635 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TRIM38O00635 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRIM38O00635 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM38O00635 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM38O00635 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM38O00635 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM38O00635 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM38O00635 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM38O00635 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM38O00635 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM38O00635 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRIM38O00635 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM38O00635 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM38O00635 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRIM38O00635 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM38O00635 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM38O00635 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM38O00635 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM38O00635 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM38O00635 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM38O00635 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.71■■□□□ 1.07
TRIM38O00635 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM38O00635 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM38O00635 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM38O00635 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TRIM38O00635 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM38O00635 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM38O00635 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM38O00635 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.7■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms