Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF11BO00300 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFRSF11BO00300 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFRSF11BO00300 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFRSF11BO00300 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
TNFRSF11BO00300 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
TNFRSF11BO00300 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF11BO00300 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF11BO00300 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF11BO00300 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20■□□□□ 0.79
TNFRSF11BO00300 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20■□□□□ 0.79
TNFRSF11BO00300 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF11BO00300 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF11BO00300 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20■□□□□ 0.79
TNFRSF11BO00300 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20■□□□□ 0.79
TNFRSF11BO00300 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20■□□□□ 0.79
TNFRSF11BO00300 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF11BO00300 AL031848.2-201ENST00000607670 837 ntBASIC20■□□□□ 0.79
TNFRSF11BO00300 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF11BO00300 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20■□□□□ 0.79
TNFRSF11BO00300 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF11BO00300 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TNFRSF11BO00300 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20■□□□□ 0.79
TNFRSF11BO00300 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20■□□□□ 0.79
TNFRSF11BO00300 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20■□□□□ 0.79
TNFRSF11BO00300 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF11BO00300 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF11BO00300 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 AC021242.3-201ENST00000607598 1377 ntBASIC19.99■□□□□ 0.79
TNFRSF11BO00300 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF11BO00300 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 AC009102.2-201ENST00000606772 1639 ntBASIC19.98■□□□□ 0.79
TNFRSF11BO00300 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 Z98882.1-201ENST00000622160 2253 ntBASIC19.98■□□□□ 0.79
TNFRSF11BO00300 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.98■□□□□ 0.79
TNFRSF11BO00300 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 SLC25A24-204ENST00000569674 2357 ntBASIC19.97■□□□□ 0.79
TNFRSF11BO00300 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 AL033527.3-201ENST00000566366 1196 ntBASIC19.97■□□□□ 0.79
TNFRSF11BO00300 AC012354.3-201ENST00000623734 483 ntBASIC19.97■□□□□ 0.79
TNFRSF11BO00300 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFRSF11BO00300 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF11BO00300 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFRSF11BO00300 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFRSF11BO00300 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms