Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHKB-CPT1BH3BT56 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CHKB-CPT1BH3BT56 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 AL020996.1-203ENST00000536896 2307 ntBASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 GUSBP5-202ENST00000510805 1989 ntBASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CHKB-CPT1BH3BT56 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 AC068587.6-202ENST00000641839 5619 ntBASIC12.13□□□□□ -0.47
CHKB-CPT1BH3BT56 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 LSR-203ENST00000360798 1963 ntTSL 2 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 401.8 ms