Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
NPIPA2E9PIF3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.74■□□□□ 0.75
NPIPA2E9PIF3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.74■□□□□ 0.75
NPIPA2E9PIF3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NPIPA2E9PIF3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NPIPA2E9PIF3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.74■□□□□ 0.75
NPIPA2E9PIF3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA2E9PIF3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA2E9PIF3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA2E9PIF3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 TERF1P2-201ENST00000583350 1212 ntBASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 NTF6G-201ENST00000591094 616 ntBASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 AL137784.2-201ENST00000607332 1000 ntBASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 AC068587.7-201ENST00000641602 218 ntBASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 C9orf163-202ENST00000624034 2573 ntBASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA2E9PIF3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 AC087239.1-201ENST00000622671 572 ntBASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.72■□□□□ 0.75
NPIPA2E9PIF3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA2E9PIF3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.7■□□□□ 0.74
NPIPA2E9PIF3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 AC010141.3-201ENST00000456659 717 ntBASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
NPIPA2E9PIF3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms