Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.47■□□□□ 0.39
SRRM4A7MD48 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRRM4A7MD48 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRRM4A7MD48 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.47■□□□□ 0.39
SRRM4A7MD48 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRRM4A7MD48 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRRM4A7MD48 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRRM4A7MD48 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SRRM4A7MD48 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRRM4A7MD48 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRRM4A7MD48 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRRM4A7MD48 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRRM4A7MD48 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRRM4A7MD48 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SRRM4A7MD48 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRRM4A7MD48 SERBP1P1-201ENST00000396021 1160 ntBASIC17.46■□□□□ 0.39
SRRM4A7MD48 AC131281.2-201ENST00000520478 145 ntBASIC17.46■□□□□ 0.39
SRRM4A7MD48 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.46■□□□□ 0.39
SRRM4A7MD48 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SRRM4A7MD48 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRRM4A7MD48 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SRRM4A7MD48 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRRM4A7MD48 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRRM4A7MD48 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.46■□□□□ 0.39
SRRM4A7MD48 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRRM4A7MD48 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.46■□□□□ 0.39
SRRM4A7MD48 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRRM4A7MD48 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SRRM4A7MD48 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.46■□□□□ 0.38
SRRM4A7MD48 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.46■□□□□ 0.38
SRRM4A7MD48 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM4A7MD48 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SRRM4A7MD48 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM4A7MD48 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM4A7MD48 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM4A7MD48 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM4A7MD48 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.45■□□□□ 0.38
SRRM4A7MD48 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM4A7MD48 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.45■□□□□ 0.38
SRRM4A7MD48 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM4A7MD48 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.45■□□□□ 0.38
SRRM4A7MD48 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.45■□□□□ 0.38
SRRM4A7MD48 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM4A7MD48 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM4A7MD48 AC010542.4-201ENST00000563151 1910 ntBASIC17.45■□□□□ 0.38
SRRM4A7MD48 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.45■□□□□ 0.38
SRRM4A7MD48 SYT6-210ENST00000641643 1587 ntBASIC17.45■□□□□ 0.38
SRRM4A7MD48 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM4A7MD48 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM4A7MD48 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM4A7MD48 OR2I1P-207ENST00000453522 948 ntBASIC17.44■□□□□ 0.38
SRRM4A7MD48 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
SRRM4A7MD48 AC079089.2-201ENST00000531211 1277 ntBASIC17.44■□□□□ 0.38
SRRM4A7MD48 AC010525.1-201ENST00000585559 441 ntBASIC17.44■□□□□ 0.38
SRRM4A7MD48 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.44■□□□□ 0.38
SRRM4A7MD48 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.44■□□□□ 0.38
SRRM4A7MD48 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.44■□□□□ 0.38
SRRM4A7MD48 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM4A7MD48 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.44■□□□□ 0.38
SRRM4A7MD48 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM4A7MD48 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM4A7MD48 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SRRM4A7MD48 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SRRM4A7MD48 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM4A7MD48 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM4A7MD48 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.43■□□□□ 0.38
SRRM4A7MD48 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SRRM4A7MD48 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.43■□□□□ 0.38
SRRM4A7MD48 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SRRM4A7MD48 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.43■□□□□ 0.38
SRRM4A7MD48 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM4A7MD48 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM4A7MD48 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.42■□□□□ 0.38
SRRM4A7MD48 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.42■□□□□ 0.38
SRRM4A7MD48 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM4A7MD48 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM4A7MD48 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SRRM4A7MD48 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SRRM4A7MD48 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM4A7MD48 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.42■□□□□ 0.38
SRRM4A7MD48 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM4A7MD48 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM4A7MD48 FAM99A-202ENST00000538190 1989 ntBASIC17.42■□□□□ 0.38
SRRM4A7MD48 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.42■□□□□ 0.38
SRRM4A7MD48 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.42■□□□□ 0.38
SRRM4A7MD48 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM4A7MD48 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.42■□□□□ 0.38
SRRM4A7MD48 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRRM4A7MD48 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM4A7MD48 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SRRM4A7MD48 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM4A7MD48 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM4A7MD48 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SRRM4A7MD48 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM4A7MD48 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM4A7MD48 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM4A7MD48 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM4A7MD48 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM4A7MD48 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SRRM4A7MD48 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms