Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM235A6NFC5 AC004687.1-201ENST00000579003 1625 ntBASIC18.48■□□□□ 0.55
TMEM235A6NFC5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TMEM235A6NFC5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEM235A6NFC5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEM235A6NFC5 AC005703.6-201ENST00000623265 1329 ntBASIC18.48■□□□□ 0.55
TMEM235A6NFC5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 DUX4L4-201ENST00000566884 1269 ntBASIC18.47■□□□□ 0.55
TMEM235A6NFC5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM235A6NFC5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 Z98882.1-201ENST00000622160 2253 ntBASIC18.46■□□□□ 0.55
TMEM235A6NFC5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 CA15P2-201ENST00000611168 834 ntBASIC18.46■□□□□ 0.55
TMEM235A6NFC5 AF106564.1-201ENST00000607058 2553 ntBASIC18.46■□□□□ 0.55
TMEM235A6NFC5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM235A6NFC5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM235A6NFC5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.45■□□□□ 0.54
TMEM235A6NFC5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TMEM235A6NFC5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 MIR4508-201ENST00000584178 70 ntBASIC18.43■□□□□ 0.54
TMEM235A6NFC5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM235A6NFC5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM235A6NFC5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM235A6NFC5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM235A6NFC5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM235A6NFC5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM235A6NFC5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
TMEM235A6NFC5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM235A6NFC5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM235A6NFC5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms