Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 AC131281.2-201ENST00000520478 145 ntBASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV6-4A0A1B0GX49 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 SERBP1P1-201ENST00000396021 1160 ntBASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 AC136469.2-201ENST00000623944 1028 ntBASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-4A0A1B0GX49 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-4A0A1B0GX49 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 AC010141.3-201ENST00000456659 717 ntBASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-4A0A1B0GX49 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 OR7E47P-201ENST00000546390 1422 ntBASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV6-4A0A1B0GX49 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-4A0A1B0GX49 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-4A0A1B0GX49 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV6-4A0A1B0GX49 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-4A0A1B0GX49 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV6-4A0A1B0GX49 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-4A0A1B0GX49 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-4A0A1B0GX49 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV6-4A0A1B0GX49 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms