Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF103-CHMP3A0A140T963 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF103-CHMP3A0A140T963 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 AC026310.3-201ENST00000625186 2373 ntBASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF103-CHMP3A0A140T963 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF103-CHMP3A0A140T963 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF103-CHMP3A0A140T963 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF103-CHMP3A0A140T963 DUX4L4-201ENST00000566884 1269 ntBASIC20.77■□□□□ 0.92
RNF103-CHMP3A0A140T963 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF103-CHMP3A0A140T963 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF103-CHMP3A0A140T963 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF103-CHMP3A0A140T963 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF103-CHMP3A0A140T963 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RNF103-CHMP3A0A140T963 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.77■□□□□ 0.91
RNF103-CHMP3A0A140T963 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF103-CHMP3A0A140T963 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF103-CHMP3A0A140T963 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 AC009086.3-201ENST00000623486 1008 ntBASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 AC080038.3-201ENST00000623346 1952 ntBASIC20.76■□□□□ 0.91
RNF103-CHMP3A0A140T963 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF103-CHMP3A0A140T963 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF103-CHMP3A0A140T963 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
RNF103-CHMP3A0A140T963 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF103-CHMP3A0A140T963 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF103-CHMP3A0A140T963 AC087742.1-201ENST00000575880 1738 ntBASIC20.74■□□□□ 0.91
RNF103-CHMP3A0A140T963 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RNF103-CHMP3A0A140T963 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF103-CHMP3A0A140T963 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF103-CHMP3A0A140T963 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 UNC93B8-201ENST00000511903 705 ntBASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF103-CHMP3A0A140T963 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms